DRSC/TRiP Functional Genomics Resources

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Protein Alignment ab and fru

DIOPT Version :10

Sequence 1:NP_476562.1 Gene:ab / 34560 FlyBaseID:FBgn0264442 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_001163648.1 Gene:fru / 42226 FlyBaseID:FBgn0004652 Length:960 Species:Drosophila melanogaster


Alignment Length:928 Identity:209/928 - (22%)
Similarity:314/928 - (33%) Gaps:293/928 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LQTAENNNAGVVKMEPPPPATSSVSVSAAAAAHALSSLSSLTMAATGSALSPATPPPSLNLSH-- 69
            |||....|.......||||                       :......|.||:  |||.:|.  
  Fly    62 LQTPHKRNIETDVRAPPPP-----------------------LPPPPLPLPPAS--PSLQISRYN 101

  Fly    70 -QQQQHQQHYALKWNDFQSSILSSFRHLRDEEDFVDVTLACDERSFTAHKVVLSACSPYFRRLLK 133
             .|....|.:.|:||:..:::......|...|...||||||:..:..||:.:||||||||..:..
  Fly   102 TDQGAMDQQFCLRWNNHPTNLTGVLTSLLQREALCDVTLACEGETVKAHQTILSACSPYFETIFL 166

  Fly   134 ANPCEHPIVILRDVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLADVNGGYPYSKA 198
            .|...|||:.|:|||..::.:||.|||.|||||....||.|||||..||:|||.|          
  Fly   167 QNQHPHPIIYLKDVRYSEMRSLLDFMYKGEVNVGQSSLPMFLKTAESLQVRGLTD---------- 221

  Fly   199 LSAALSHNSSNNNNNNSSSNNSLSNNNNNNNNNAESSNH-------NKISSYLSPNQTS--AACN 254
                      |||.|..|..:.|.::..::......||:       ..::..:..::.|  :.|.
  Fly   222 ----------NNNLNYRSDCDKLRDSAASSPTGRGPSNYTGGLGGAGGVADAMRESRDSLRSRCE 276

  Fly   255 NSSNSNSNNHSSSHNNSSSNNIS-------------GSLNSS-----LNSPFSAPQIPPPVTASS 301
            ..........|||..:..|:..:             |::|::     |.:|....:.|...:||:
  Fly   277 RDLRDELTQRSSSSMSERSSAAAAAAAAAAAVAAAGGNVNAAAVALGLTTPTGGERSPSVGSASA 341

  Fly   302 AAAAAAAAASLTAAVAAAAAATAASAGSSSSAASGQTSGTPAIQEL----------KASSAASPV 356
            ||||||.||::.||...:|:|...|...|......:|.....:.:|          .:||.....
  Fly   342 AAAAAAVAAAVAAAANRSASADGCSDRGSERGTLERTDSRDDLLQLDYSNKDNNNSNSSSTGGNN 406

  Fly   357 RNPNPNPSKASSSNHWDMG----------------EMEGSRKSHLTPPPQKRIKSADLFRAQHGI 405
            .|.|.|.:.:||:|:....                |.|..|...|:..|.:::.|:...|.....
  Fly   407 NNNNNNNNNSSSNNNNSSSNRERNNSGERERERERERERDRDRELSTTPVEQLSSSKRRRKNSSS 471

  Fly   406 SPERLL----LDREFPVAGQHPLTRN---RSGRDTSKDRER---------------------NLE 442
            :.:..|    .||.:|...|.....:   ::|..||:..:.                     |:.
  Fly   472 NCDNSLSSSHQDRHYPQDSQANFKSSPVPKTGGSTSESEDAGGRHDSPLSMTTSVHLGGGGGNVG 536

  Fly   443 LRESLLG--------QALENSNGQQANPKHE-----------------------LGQSAGEDSNS 476
            ...:|.|        |.|.::..||.:.:|.                       |.|.|.:.:::
  Fly   537 AASALSGLSQSLSIKQELMDAQQQQQHREHHVALPPDYLPSAALKLHAEDMSTLLTQHALQAADA 601

  Fly   477 SDTEPSDRGDGQHDGTLDGID--------------------NQRSHSFPNAFLGLQGIPGLLPGP 521
            .| |.:|....|.|.| |.||                    |.|.|         ...||::   
  Fly   602 RD-EHNDAKQLQLDQT-DNIDGRVKCFNIKHDRHPDRELDRNHREH---------DDDPGVI--- 652

  Fly   522 SGINSDFVSRRSL-------EMRVRATDPRPCPKCGKIYRSAHTLRTHLEDKHT---------VC 570
            ..:..|.|.....       ||:..|....| ||    ||.|........|:..         |.
  Fly   653 EEVVVDHVREMEAGNEHDPEEMKEAAYHATP-PK----YRRAVVYAPPHPDEEAASGSGSDIYVD 712

  Fly   571 PGYRC-----------VLCGTVAKSRNSLHSHMSRQHRGISTKDLPVLPMPSAFDPELASR--LL 622
            .||.|           :.|    ..:..:.||.|..|.  ..:.|...|..:|:.|.:|:.  .|
  Fly   713 GGYNCEYKCKELNMRAIRC----SRQQHMMSHYSPHHP--HHRSLIDCPAEAAYSPPVANNQAYL 771

  Fly   623 AKAGV------------------KISPAELRARASPTGGSGSSGGGGGGGSSQAKLDLSNASGGP 669
            |..|.                  :..|:......|.:.....|..|.|.|:....:.::.::.|.
  Fly   772 ASNGAVQQLDLSTYHGHANHQLHQHPPSATHPSHSQSSPHYPSASGAGAGAGSVSVSIAGSASGS 836

  Fly   670 MDDAEDS------DDDPEDLTTGNGLYGMGGSSSDLSRYHESLLSNFGHARMRNEAAAVAATAAA 728
            ...|..|      ...|...:||:                            .:.||||||.|||
  Fly   837 ATSAPASVATSAVSPQPSSSSTGS----------------------------TSSAAAVAAAAAA 873

  Fly   729 LGQPKD-------LGVQL 739
            ....:|       |.|||
  Fly   874 AANRRDHNIDYSTLFVQL 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abNP_476562.1 BTB_POZ_BAB-like 102..185 CDD:349624 43/82 (52%)
zf-Di19 545..597 CDD:428539 15/71 (21%)
C2H2 Zn finger 546..567 CDD:275371 6/20 (30%)
C2H2 Zn finger 575..596 CDD:275371 5/31 (16%)
fruNP_001163648.1 BTB_POZ_BAB-like 135..218 CDD:349624 43/82 (52%)
C2H2 Zn finger 901..918 CDD:275368
C2H2 Zn finger 925..944 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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