DRSC/TRiP Functional Genomics Resources

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Protein Alignment ab and Nacc2

DIOPT Version :10

Sequence 1:NP_476562.1 Gene:ab / 34560 FlyBaseID:FBgn0264442 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_001094003.1 Gene:Nacc2 / 296583 RGDID:1309292 Length:585 Species:Rattus norvegicus


Alignment Length:591 Identity:110/591 - (18%)
Similarity:182/591 - (30%) Gaps:197/591 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 DFQSSILSSFRHLRDEEDFVDVTLACDERSFTAHKVVLSACSPYFRRLLKAN---PCEHPIVILR 145
            :|.:::|......|....:.||::....::|.||:.||:|.|.|||.|...|   ..|.|..:  
  Rat    11 NFGNTVLGCLNEQRLLGLYCDVSIVVKGQAFKAHRAVLAASSLYFRDLFSGNSKSAFELPGTV-- 73

  Fly   146 DVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLAD------VNGGYPYSKALSAALS 204
            ...|  .:.:|||.|.|::.::..:....:.||..|||:.:.:      .....|:..:.:|.:.
  Rat    74 PPAC--FQQILSFCYTGKLTMAASEQLVVMYTAGFLQIQHIVERGTDLMFKVSSPHCDSQTAMIE 136

  Fly   205 HNSSNNNN--------------------------------------NNSSSNNSLSNNNNNNNNN 231
            ..||...:                                      ...:|...|.....:....
  Rat   137 DASSEPQSPCNQLQPATAAYATSPSVPIPLLTRVKHEAMEMPPATGPGLASKRPLDTGPRDGVAV 201

  Fly   232 AESSNHN---------KISSYLSPN-----------------QTSAACNNSSNSNSNNHSSSHNN 270
            |..:...         ::|.|..|:                 :||...  ||...:::.:|.||.
  Rat   202 ATGAAGTPGTAPLKLPRVSYYGVPSLATLIPSIQQVPYPQGERTSPGA--SSLPTTDSPTSYHNE 264

  Fly   271 SSSNNIS---------GSLNSSLNSPFSAPQIPPPVTASSAAAA------AAAAASLTAAVAAAA 320
            ...::.:         |.:.......::..:.|.||...|.:..      .|..|||.:.:....
  Rat   265 DEDDDEAYDTMVEEQYGQMYIKATGNYAVQEKPEPVPLESRSCVLIRRDLVALPASLISQIGYRC 329

  Fly   321 AATAAS-----------AGSSSSAASGQTSGTPAIQELK------------------ASSAASPV 356
            .....|           |||......||.........:|                  |:|..:.:
  Rat   330 HPKLYSEGDPGEKLELVAGSGVYITRGQLMNCHLCAGVKHKVLLRRLLATFFDRNTLANSCGTGI 394

  Fly   357 RNPNPNPSK------------------ASSSNHWDMGEMEGS--------RKSHLTPPPQKRIKS 395
            |:...:||:                  |.|....:|..:...        ||..|     .:|||
  Rat   395 RSSTSDPSRKPLDSRVLNAVKLYCQNFAPSFKESEMNVIAADMCTNARRVRKRWL-----PKIKS 454

  Fly   396 -----ADLFRAQHGISPERLLLDREFPVAGQHPLTRNRSGRDTSKDRERNLELRESLLGQALENS 455
                 .:::|:..|.|...|.||.|||.|... :...|...:...|....:.||...:...|..|
  Rat   455 MLPEGVEMYRSVMGASAASLPLDPEFPSAASQ-VFEQRIYAERRNDAATIVALRTDAVNVDLSTS 518

  Fly   456 NGQQANPKHEL-----------------------GQS---AGEDSNSSDTEP-------SDRGDG 487
                |||..|.                       |||   |.|..|:|.:.|       :.|.:|
  Rat   519 ----ANPAFEANEEVDGAGSVIQEVAAPEQLPADGQSSPQAFEQGNTSSSRPQTPVATATRRPEG 579

  Fly   488 QHDGTL 493
            .:.|||
  Rat   580 TYAGTL 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abNP_476562.1 BTB_POZ_BAB-like 102..185 CDD:349624 27/85 (32%)
zf-Di19 545..597 CDD:428539
C2H2 Zn finger 546..567 CDD:275371
C2H2 Zn finger 575..596 CDD:275371
Nacc2NP_001094003.1 BTB_POZ_BTBD14A_NAC2 1..131 CDD:349598 31/123 (25%)
PHA03247 <138..260 CDD:223021 12/123 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 238..269 7/32 (22%)
BEN 370..447 CDD:214981 9/76 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 541..585 11/43 (26%)
Blue background indicates that the domain is not in the aligned region.

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