DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ab and Zbtb20

DIOPT Version :9

Sequence 1:NP_476562.1 Gene:ab / 34560 FlyBaseID:FBgn0264442 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_001099350.2 Gene:Zbtb20 / 288105 RGDID:1560387 Length:741 Species:Rattus norvegicus


Alignment Length:756 Identity:152/756 - (20%)
Similarity:243/756 - (32%) Gaps:256/756 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTESTQLQTAENNNA---------GVVKMEPPPPATSSVSVSA--AAAAHALSSLSSLTMAATGS 54
            |.|..:.:||||..|         |....:|..|..:..:|.:  .|..|:..||:: :.|.|||
  Rat     1 MLERKKPKTAENQKASEENEITQPGGSSAKPGLPCLNFEAVLSPDPALIHSTHSLTN-SHAHTGS 64

  Fly    55 ALSPATPPPSLNLSHQQQQHQQHYALKWNDFQSSILSSFRHLRDEEDFVDVTLACDERSFTAHKV 119
            :        ..::|.:....:.| ::..::|.:|:|.:....|:...|.|||:........||:.
  Rat    65 S--------DCDISCKGMTERIH-SINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRC 120

  Fly   120 VLSACSPYF--RRLLKANPCEHPIVILRDVRCDDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQ 182
            ||:|.||:|  :.||..:..|.|.|    |....|:.|:.|||:|.:.||..:....|..|.:||
  Rat   121 VLAAGSPFFQDKLLLGYSDIEIPSV----VSVQSVQKLIDFMYSGVLRVSQSEALQILTAASILQ 181

  Fly   183 IRGL---------------------------------------ADVNGGYPYS-------KALSA 201
            |:.:                                       :|...||..|       :..||
  Rat   182 IKTVIDECTRIVSQNVGDVFPGIQDSGQDTPRGTPESGTSGQSSDTESGYLQSHPQHSVDRIYSA 246

  Fly   202 ALSHNSSNNNNNNSSSNNSLSNNNNN-----NNNNAESSN-----HNK---ISSYLS--PNQT-- 249
            ..:.:..|.:...|..:.::.:::..     .:::.|..:     |.:   :..|||  |..|  
  Rat   247 LYACSMQNGSGERSFYSGAVVSHHETALGLPRDHHMEDPSWITRIHERSQQMERYLSTTPETTHC 311

  Fly   250 -----------------------------------------SAACNNSSNSNSNNHSSSHNNSSS 273
                                                     |..|...::......|.....|..
  Rat   312 RKQPRPVRIQTLVGNIHIKQEMEDDYDYYGQQRVQILERNESEECTEDTDQAEGTESEPKGESFD 376

  Fly   274 NNISGSLNSSLNSPFSAPQIPPPVTASSAAAAAAAAASLTAAVAAAAAATAASAGSSSSAASGQT 338
            :.:|.|:.:   .|.|..|            ...|.|:....|.||....||.|.:.|||...|.
  Rat   377 SGVSSSIGT---EPDSVEQ------------QFGAGATREGQVEAAQPEQAAEAPAESSAQPNQL 426

  Fly   339 SGTPAIQELKASSAASPVRNPNPNPSKA--SSSNHWDMGEM-EGSRKSHLTPPPQKRIKSADLFR 400
            .          :.|:||.|:........  :.||..|.|.: :.|..:.:..|    :.|..|:.
  Rat   427 E----------TGASSPERSTEVEMDNTVITVSNSSDKGVLQQPSVNTSIGQP----LPSTQLYL 477

  Fly   401 AQHGISPERLLLDREFPVAGQHPLTRNRSGRDTSKDRERNLELRESLLGQALENSNGQQANPKHE 465
            .|    .|.|..:...|:.    ||.|                 ..::|.|     |....|...
  Rat   478 RQ----TETLTSNLRMPLT----LTSN-----------------TQVIGTA-----GNTYLPALF 512

  Fly   466 LGQSAGEDSNSSDTEPSDRGDGQHDGTLDGIDNQRSHSFPNAFLGLQ------GIPGL------L 518
            ..|.||     |..:|.                  ..|.|....|.|      ..|||      |
  Rat   513 TTQPAG-----SGPKPF------------------LFSLPQPLTGQQTQFVTVSQPGLSTFTAQL 554

  Fly   519 PGPSGI-----------------------NSDFVSRRSL--EMRVRATD-PRPCPKCGKIYRSAH 557
            |.|..:                       |..|.::::.  .|.|...: |..|..|.:.:....
  Rat   555 PAPQPLASSASHSTASGQGDKKPYECTLCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKD 619

  Fly   558 TLRTHLEDKHTVCPGYRCVLCGTVAKSRNSLHSHMSRQHRG 598
            .|..|:. .||....|:|.:|......::||:.|| |.|||
  Rat   620 YLIKHMV-THTGVRAYQCSICNKRFTQKSSLNVHM-RLHRG 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abNP_476562.1 BTB 93..189 CDD:279045 32/136 (24%)
BTB 104..189 CDD:197585 30/125 (24%)
zf-Di19 545..597 CDD:283297 14/51 (27%)
C2H2 Zn finger 546..567 CDD:275371 4/20 (20%)
C2H2 Zn finger 575..596 CDD:275371 7/20 (35%)
Zbtb20NP_001099350.2 BTB_POZ_ZBTB20_DPZF 79..195 CDD:349517 36/120 (30%)
zf-C2H2 578..600 CDD:395048 3/21 (14%)
C2H2 Zn finger 580..600 CDD:275368 3/19 (16%)
SUF4-like 608..>657 CDD:411020 14/50 (28%)
C2H2 Zn finger 608..629 CDD:411020 4/21 (19%)
C2H2 Zn finger 608..628 CDD:275368 4/20 (20%)
zf-C2H2 634..656 CDD:395048 8/22 (36%)
C2H2 Zn finger 636..656 CDD:411020 7/20 (35%)
C2H2 Zn finger 636..656 CDD:275368 7/20 (35%)
zf-H2C2_2 648..673 CDD:404364 8/12 (67%)
C2H2 Zn finger 664..684 CDD:275368
C2H2 Zn finger 717..737 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.