DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ab and Zbtb12

DIOPT Version :9

Sequence 1:NP_476562.1 Gene:ab / 34560 FlyBaseID:FBgn0264442 Length:904 Species:Drosophila melanogaster
Sequence 2:NP_942589.3 Gene:Zbtb12 / 193736 MGIID:88133 Length:459 Species:Mus musculus


Alignment Length:565 Identity:110/565 - (19%)
Similarity:158/565 - (27%) Gaps:221/565 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 QSSILSSFRHLRDEEDFVDVTLACDERSFTAHKVVLSACSPYFRRLLKANP-CEHPIVILRDVRC 149
            :::.|.:...||.||.|.|||:..|...|..|||:|:||||:.|.....|| .|..:.::...|.
Mouse    16 EAATLRNMNQLRAEERFCDVTIVADSLKFRGHKVILAACSPFLRDQFLLNPSSELQVSLMHSARI 80

  Fly   150 DDVENLLSFMYNGEVNVSHEQLPDFLKTAHLLQIRGLADVNGGYPYSKALSAALSHNSSNNNNNN 214
              |.:||...|.|.:..:...:.::|..|                                    
Mouse    81 --VADLLLSCYTGALEFAVRDIVNYLTAA------------------------------------ 107

  Fly   215 SSSNNSLSNNNNNNNNNAESSNHNKISSYLSPNQTSAACNNSSNSNSNNHSSSHNNSSSNNISGS 279
                                       |||........|.|:.                      
Mouse   108 ---------------------------SYLQMEHVVEKCRNAL---------------------- 123

  Fly   280 LNSSLNSPFSAPQIPPPVTASSAAAAAAAAASLTAAVAAAAAATAASAGSSSSAASGQTSGTPAI 344
                  |.|..|:|       .......:.|||.::|:|                          
Mouse   124 ------SQFIEPKI-------GLKEDGVSEASLLSSVSA-------------------------- 149

  Fly   345 QELKASSAASPVRNPNPNPSKASSSNHWDMGEMEGSRKSHLTPPPQKRIKSADLFRAQHGISPER 409
                ..|...|.|.|.|.|.                      |||...:             |..
Mouse   150 ----TKSLLPPARTPKPAPK----------------------PPPPPPL-------------PPP 175

  Fly   410 LL--LDREFPVAGQHPLTRNRSGRDTSKD--------RERNLELRESLLGQ-ALENSNGQQANPK 463
            ||  :..|||:.....|.......|..:|        .|..||:...|... :|....|..|:..
Mouse   176 LLRPVKLEFPLDEDLELKAEEEDEDEDEDVSDICIVKVESALEVAHRLKPPGSLAGGLGIGASVS 240

  Fly   464 HELGQSAGED-----------------SNSSDTE-------PSDRGD-GQHDGTLDGIDNQRSHS 503
            ..||:.|...                 |.|.|.|       |..|.. |...|.::......:..
Mouse   241 SHLGELAQSSVAPNTVTPPQGVVKACYSLSEDAEGEGLLLIPGGRASVGATSGLVEAAAVAMAAR 305

  Fly   504 FPNAFLGLQGIPGLLPGPSGINSD--------------FVSRRSLEMRVRATD-PRPCPKCGKIY 553
            .....||..|..|.|||  |.:|.              |.....|...:||.. ...||:|||.:
Mouse   306 GAGGSLGAGGSRGPLPG--GFSSGNPLKNIKCTKCPEVFQGVEKLVFHMRAQHFIFMCPRCGKQF 368

  Fly   554 RSAHTLRTHLEDKHTVCPGYRCVLCGTVAKSRNSLHSHMSRQHRG 598
            ..:..|..|: :.|.....:.|.:||.....:::||.|:: .|.|
Mouse   369 NHSSNLNRHM-NVHRGVKSHSCGICGKCFTQKSTLHDHLN-LHSG 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abNP_476562.1 BTB 93..189 CDD:279045 30/96 (31%)
BTB 104..189 CDD:197585 25/85 (29%)
zf-Di19 545..597 CDD:283297 14/51 (27%)
C2H2 Zn finger 546..567 CDD:275371 7/20 (35%)
C2H2 Zn finger 575..596 CDD:275371 6/20 (30%)
Zbtb12NP_942589.3 BTB_POZ_ZBTB12 8..129 CDD:349512 38/205 (19%)
C2H2 Zn finger 335..355 CDD:275368 3/19 (16%)
zf-C2H2 359..381 CDD:333835 7/22 (32%)
COG5048 <361..>448 CDD:227381 16/53 (30%)
C2H2 Zn finger 361..381 CDD:275368 7/20 (35%)
zf-H2C2_2 373..398 CDD:372612 6/25 (24%)
C2H2 Zn finger 389..409 CDD:275368 6/20 (30%)
C2H2 Zn finger 417..435 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.