DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-beta and CACNB4

DIOPT Version :9

Sequence 1:NP_001260375.1 Gene:Ca-beta / 34557 FlyBaseID:FBgn0259822 Length:844 Species:Drosophila melanogaster
Sequence 2:NP_000717.2 Gene:CACNB4 / 785 HGNCID:1404 Length:520 Species:Homo sapiens


Alignment Length:549 Identity:287/549 - (52%)
Similarity:358/549 - (65%) Gaps:85/549 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LFTQGSADSNYSQPS-SDLSLDEEKESLRREKERQALSQLDKARSKPVAFAVRTNVAYDGAIDDD 100
            :..||||||..|:|| ||:||:|::|::|:|:|:||..||::|:||||||||:|||:|.||:|:|
Human    46 ILRQGSADSYTSRPSDSDVSLEEDREAIRQEREQQAAIQLERAKSKPVAFAVKTNVSYCGALDED 110

  Fly   101 SPVQGGAVSFEIREFLHIKEKYDNNWWIGRLVKEGCDVGFIPSPAKLDNIRMQNQTRPSRLYGTK 165
            .||...|:||:.::||||||||:|:|||||||||||::||||||.:|:|||:|.:.:..|.:|  
Human   111 VPVPSTAISFDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLRLENIRIQQEQKRGRFHG-- 173

  Fly   166 GSSSGNLGAGGQAGAEPSRGSTPPTPGDESDSMG---PGRHGKTPAAAANKEKRKPFFKKQETAS 227
            |.||||                      .|.|:|   .|....||.:.| |:|:    |..|...
Human   174 GKSSGN----------------------SSSSLGEMVSGTFRATPTSTA-KQKQ----KVTEHIP 211

  Fly   228 PYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRIIITRVMADISLAKRSIMNNPSK 292
            |||||||||||||||||||||||||||||||||||||||:|||.||||.|||||||||::|||||
Human   212 PYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFDGRISITRVTADISLAKRSVLNNPSK 276

  Fly   293 RAIMERSSSRSDCLGKVQEEIERIFELARSLQLVVLDCDTINHPSQLAKTSLAPTIVYLKISSSK 357
            |||:|||::||. |.:||.||||||||||||||||||.||||||:||.||||||.||::|:||.|
Human   277 RAIIERSNTRSS-LAEVQSEIERIFELARSLQLVVLDADTINHPAQLIKTSLAPIIVHVKVSSPK 340

  Fly   358 VLQRLIKSRGKSQAKNLSVQMVAAEKLAQCPPDMFDVILDENQLEDACEHIAEYLETYWKATH-- 420
            |||||||||||||:|:|:||:|||:|||||||:|||||||||||||||||:.||||.||:|||  
Human   341 VLQRLIKSRGKSQSKHLNVQLVAADKLAQCPPEMFDVILDENQLEDACEHLGEYLEAYWRATHTT 405

  Fly   421 PDIRAVPPIARPLPQEASPSADPARLGPTPPVDGEEFVDEQDPRMGMSGGDREGSRERDRDSRER 485
            ......|.:.|.|...|        |.|.|              ..:||...:..|..:..:...
Human   406 SSTPMTPLLGRNLGSTA--------LSPYP--------------TAISGLQSQRMRHSNHSTENS 448

  Fly   486 ERERERERDYWDREFNRDRSSKDRERDLEWERERAREWERERERDWDREFDWDQGGTSYQHSRRQ 550
            ..|| |.....|..::.:|:.|.|.| |....:.:|:.....|.|:.         .|||.:.:.
Human   449 PIER-RSLMTSDENYHNERARKSRNR-LSSSSQHSRDHYPLVEEDYP---------DSYQDTYKP 502

  Fly   551 PTSVRHQERGGGVGAGGGGGGVGGGYERD 579
                 |:.||.           .|||..|
Human   503 -----HRNRGS-----------PGGYSHD 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-betaNP_001260375.1 VGCC_beta4Aa_N 41..81 CDD:288872 22/40 (55%)
SH3_CACNB 85..146 CDD:212797 42/60 (70%)
Guanylate_kin 234..415 CDD:279019 151/180 (84%)
NK 244..416 CDD:302627 141/171 (82%)
CACNB4NP_000717.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..71 14/24 (58%)
VGCC_beta4Aa_N 50..91 CDD:371868 22/40 (55%)
SH3_CACNB4 91..158 CDD:212976 46/66 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..185 9/42 (21%)
Guanylate_kin 218..398 CDD:366206 151/180 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..520 27/132 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 299 1.000 Domainoid score I1433
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20188
Inparanoid 1 1.050 537 1.000 Inparanoid score I1199
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000994
OrthoInspector 1 1.000 - - otm40473
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11824
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1029
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
99.060

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