DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ca-beta and cacnb2

DIOPT Version :9

Sequence 1:NP_001260375.1 Gene:Ca-beta / 34557 FlyBaseID:FBgn0259822 Length:844 Species:Drosophila melanogaster
Sequence 2:XP_031759789.1 Gene:cacnb2 / 100495884 XenbaseID:XB-GENE-962360 Length:647 Species:Xenopus tropicalis


Alignment Length:638 Identity:327/638 - (51%)
Similarity:399/638 - (62%) Gaps:126/638 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SSDAPSVQ---GGQHRESRF--GLGYPSYQSGYNKLFTQGSADSNYSQPS-SDLSLDEEKESLRR 65
            |.:.|:||   .|..|:.||  ..|..|..:..|....||||||..|:|| ||:||:|::|::||
 Frog    21 SLENPAVQTYGKGARRKHRFKGSDGSTSSDTTSNSFVRQGSADSYTSRPSDSDVSLEEDREAVRR 85

  Fly    66 EKERQALSQLDKARSKPVAFAVRTNVAYDGAIDDDSPVQGGAVSFEIREFLHIKEKYDNNWWIGR 130
            |.||||.:||:||::|||||||||||.|..|.||:.||.|.|:|||.::|||:|||::|:|||||
 Frog    86 EAERQAQAQLEKAKTKPVAFAVRTNVGYSAAHDDEVPVPGMAISFEAKDFLHVKEKFNNDWWIGR 150

  Fly   131 LVKEGCDVGFIPSPAKLDNIRMQNQ--TRPSRLYGTK--GSSSGNLGAGGQAGAEP-SRGSTPPT 190
            ||||||::||||||.||:|:|:|::  |:..:.|.:|  |:||.:||     ...| ||.||||:
 Frog   151 LVKEGCEIGFIPSPVKLENMRIQHEQKTKQGKFYTSKSGGNSSSSLG-----DVVPSSRRSTPPS 210

  Fly   191 PGDESDSMG---------PGRHGKTPAAAAN-------KEKRKPFFKKQETASPYDVVPSMRPVV 239
            ...:.|:.|         |..| ::|..:||       ||||.|||||.|...||||||||||||
 Frog   211 SAIDLDATGLEAEELDIPPANH-RSPKPSANSLTSPHSKEKRMPFFKKTEHIPPYDVVPSMRPVV 274

  Fly   240 LVGPSLKGYEVTDMMQKALFDFLKHRFEGRIIITRVMADISLAKRSIMNNPSKRAIMERSSSRSD 304
            |||||||||||||||||||||||||||||||.||||.|||||||||::|||||.||:|||::||.
 Frog   275 LVGPSLKGYEVTDMMQKALFDFLKHRFEGRISITRVTADISLAKRSVLNNPSKHAIIERSNTRSS 339

  Fly   305 CLGKVQEEIERIFELARSLQLVVLDCDTINHPSQLAKTSLAPTIVYLKISSSKVLQRLIKSRGKS 369
             |.:||.||||||||||:|||||||.||||||:||.||||||.|||:||||.|||||||||||||
 Frog   340 -LAEVQSEIERIFELARTLQLVVLDADTINHPTQLGKTSLAPIIVYVKISSPKVLQRLIKSRGKS 403

  Fly   370 QAKNLSVQMVAAEKLAQCPPDMFDVILDENQLEDACEHIAEYLETYWKATHPD---------IRA 425
            |||:|:||||||:|||||||:|||||||||||||||||:|:|||.|||||||.         .|.
 Frog   404 QAKHLNVQMVAADKLAQCPPEMFDVILDENQLEDACEHLADYLEAYWKATHPPSSNPTNVLLSRT 468

  Fly   426 VPPIARPL-PQEASPS------------ADPARLGPTPPVDGEEFVDEQDPRMG--------MSG 469
            :.....|: |..||.:            :.|.|.|........|...:...|..        .||
 Frog   469 LTTATLPITPTSASNTQQSSQGDHQNQHSAPERTGSVEEDTSAEATKKSHHRSSSSAQHHNHRSG 533

  Fly   470 GDREGSRE------------------------------------------------RDRDSRERE 486
            |.|..||:                                                |.::||.|.
 Frog   534 GSRGLSRQDTFDNETQANRDSVYLDPKEDFSSEHGAPPDSHREHNHRDETHAVSEHRHKESRHRS 598

  Fly   487 RERERERDYWDREFNRDRS---SKDR--ERDLEWERERAREWERERERDWDRE 534
            .|.:||.|:  .|.|:.||   |:||  |:|.|..|:|       .|.||:|:
 Frog   599 NEPDREHDH--NECNKPRSRHKSRDRHCEKDGEVPRKR-------NEADWNRD 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ca-betaNP_001260375.1 VGCC_beta4Aa_N 41..81 CDD:288872 25/40 (63%)
SH3_CACNB 85..146 CDD:212797 42/60 (70%)
Guanylate_kin 234..415 CDD:279019 154/180 (86%)
NK 244..416 CDD:302627 144/171 (84%)
cacnb2XP_031759789.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 300 1.000 Domainoid score I1406
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 535 1.000 Inparanoid score I1175
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000994
OrthoInspector 1 1.000 - - otm47649
Panther 1 1.100 - - LDO PTHR11824
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1029
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.060

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