DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6287 and pdxB

DIOPT Version :10

Sequence 1:NP_609496.1 Gene:CG6287 / 34554 FlyBaseID:FBgn0032350 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_416823.1 Gene:pdxB / 946785 ECOCYCID:G0-9461 Length:378 Species:Escherichia coli


Alignment Length:293 Identity:80/293 - (27%)
Similarity:129/293 - (44%) Gaps:44/293 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LPVEELCQEVKNFDAAIVRSDTKITAEVLAAGSGSLKVVGRAGAGVDNIDVPAATAQNVVVLNTP 99
            :||.:|.    :.||.:|||.||:. |.|.||. .:|.||.|.||.|::|........:.....|
E. coli    30 IPVAQLA----DADALMVRSVTKVN-ESLLAGK-PIKFVGTATAGTDHVDEAWLKQAGIGFSAAP 88

  Fly   100 GGNSISACELTCILIGSLARPVVPAGQSMKEGRWDRKLYAGTELYGKTLAVLGLGRIGREVAIRM 164
            |.|:|:..|.....:..||               :|.   |..||.:|:.::|:|.:||.:..|:
E. coli    89 GCNAIAVVEYVFSSLLMLA---------------ERD---GFSLYDRTVGIVGVGNVGRRLQARL 135

  Fly   165 KTWGMRIIGYDPITTEAEAKAAGIEKMTLEEIWPLADYITVHTPLIP----ATRNLISAETLAKC 225
            :..|::.:..||  ..|:....| :..:|:|:...||.:|.||||..    .|.:|...:.:...
E. coli   136 EALGIKTLLCDP--PRADRGDEG-DFRSLDELVQRADILTFHTPLFKDGPYKTLHLADEKLIRSL 197

  Fly   226 KQGVKVVNVARGGIIDEQAVLDGLESGKVAGAAFDVYPEEPPKSAVTKALISHPKVVATPHLGAS 290
            |.|..::|..||.::|..|:|..|..|:......||:..||..:......:.    :.|.|:...
E. coli   198 KPGAILINACRGAVVDNTALLTCLNEGQKLSVVLDVWEGEPELNVELLKKVD----IGTSHIAGY 258

  Fly   291 TSEAQVRVAVEV---------AEQFIALNGTSP 314
            |.|.:.|...:|         .||.:||:...|
E. coli   259 TLEGKARGTTQVFEAYSKFIGHEQHVALDTLLP 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6287NP_609496.1 PGDH_4 7..311 CDD:240650 79/288 (27%)
pdxBNP_416823.1 PRK15438 1..378 CDD:185335 80/293 (27%)

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