DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6287 and PGDH

DIOPT Version :10

Sequence 1:NP_609496.1 Gene:CG6287 / 34554 FlyBaseID:FBgn0032350 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_001031061.2 Gene:PGDH / 838352 AraportID:AT1G17745 Length:651 Species:Arabidopsis thaliana


Alignment Length:352 Identity:144/352 - (40%)
Similarity:204/352 - (57%) Gaps:33/352 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KVLVCDAVDKSCVELLEQHG-IKVTYKLKLPVEELCQEVKNFDAAIVRSDTKITAEVLAAGSGSL 70
            ::||.:.:.::.|.||.:.| :..:|.|.  .|:|.::|...||.||||.||:|.||..|..|.|
plant    84 RILVTEKLGEAGVNLLREFGDVDCSYDLS--PEDLKKKVAESDALIVRSGTKVTREVFEAAKGRL 146

  Fly    71 KVVGRAGAGVDNIDVPAATAQNVVVLNTPGGNSISACELTCILIGSLARPVVPAGQSMKEG---- 131
            |||||||.|:||:|:.|||....:|:|.|..|:::|.|....|:.|:||.|..|..|:|.|    
plant   147 KVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADASIKAGTLNY 211

  Fly   132 -------RWD----------------RKLYAGTELYGKTLAVLGLGRIGREVAIRMKTWGMRIIG 173
                   ||:                |..|.|..|.||||||:|.|::|.|||.|.|..||.:|.
plant   212 LFLVLLLRWNCRQSKHQYTIETETEKRSKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMTVIS 276

  Fly   174 YDPITTEAEAKAAGIEKMTLEEIWPLADYITVHTPLIPATRNLISAETLAKCKQGVKVVNVARGG 238
            :||......|:|.|::.::.::....||::::|.||.|||:.:.:.||.:|.|:||:::||||||
plant   277 HDPYAPADRARALGVDLVSFDQAISTADFVSLHMPLTPATKKVFNDETFSKMKKGVRLINVARGG 341

  Fly   239 IIDEQAVLDGLESGKVAGAAFDVYPEEPPKSAVTKALISHPKVVATPHLGASTSEAQVRVAVEVA 303
            :|||.|::..|::|.||.||.||:.||||..  ...||.|..|..||||||||.|||..||:|:|
plant   342 VIDEDALVRALDAGIVAQAALDVFCEEPPSK--DSRLIQHENVTVTPHLGASTKEAQEGVAIEIA 404

  Fly   304 EQFI-ALNGTSPKYTSYAGVINKEALA 329
            |... ||.|........|.::..|.|:
plant   405 EAVAGALKGELSATAVNAPMVAPEVLS 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6287NP_609496.1 PGDH_4 7..311 CDD:240650 140/332 (42%)
PGDHNP_001031061.2 Rossmann-fold NAD(P)(+)-binding proteins 84..651 CDD:473865 144/352 (41%)

Return to query results.
Submit another query.