DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6287 and Phgdh

DIOPT Version :10

Sequence 1:NP_609496.1 Gene:CG6287 / 34554 FlyBaseID:FBgn0032350 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_113808.1 Gene:Phgdh / 58835 RGDID:61987 Length:533 Species:Rattus norvegicus


Alignment Length:325 Identity:172/325 - (52%)
Similarity:236/325 - (72%) Gaps:8/325 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NIRKVLVCDAVDKSCVELLEQHGIKVTYKLKLPVEELCQEVKNFDAAIVRSDTKITAEVLAAGSG 68
            |:||:|:.|::|..|.::|:..|::|..|..|..|||..|:::.:..||||.||:||:|:.|.. 
  Rat     5 NLRKILISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAAE- 68

  Fly    69 SLKVVGRAGAGVDNIDVPAATAQNVVVLNTPGGNSISACELTCILIGSLARPVVPAGQSMKEGRW 133
            .|:||||||.||||:|:.|||.:.|:|:|||.|||:||.||||.::..|||.:..|..|||:|:|
  Rat    69 KLQVVGRAGTGVDNVDLEAATRKGVLVMNTPNGNSLSAAELTCGMLMCLARQIPQATASMKDGKW 133

  Fly   134 DRKLYAGTELYGKTLAVLGLGRIGREVAIRMKTWGMRIIGYDPITTEAEAKAAGIEKMTLEEIWP 198
            |||.:.||||.||||.:|||||||||||.||:.:||:.:|||||.:...|.:.|::::.||||||
  Rat   134 DRKKFMGTELNGKTLGILGLGRIGREVAARMQAFGMKTVGYDPIISPEVAASFGVQQLPLEEIWP 198

  Fly   199 LADYITVHTPLIPATRNLISAETLAKCKQGVKVVNVARGGIIDEQAVLDGLESGKVAGAAFDVYP 263
            |.|:|||||||:|:|..|::..|.|:||:||:|||.|||||:||.|:|..|:||:.||||.||:.
  Rat   199 LCDFITVHTPLLPSTTGLLNDSTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFT 263

  Fly   264 EEPPKSAVTKALISHPKVVATPHLGASTSEAQVRVAVEVAEQFIALNGTSPKYTSYAGVINKEAL 328
            ||||:.   :||:.|..|::.|||||||.|||.|...|:|.||:.:    .|..|..||:|.:||
  Rat   264 EEPPRD---RALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDM----VKGKSLTGVVNAQAL 321

  Fly   329  328
              Rat   322  321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6287NP_609496.1 PGDH_4 7..311 CDD:240650 163/303 (54%)
PhgdhNP_113808.1 PGDH_4 8..310 CDD:240650 164/309 (53%)
PGDH_inter 330..>407 CDD:437136
Blue background indicates that the domain is not in the aligned region.

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