DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6287 and CG1236

DIOPT Version :10

Sequence 1:NP_609496.1 Gene:CG6287 / 34554 FlyBaseID:FBgn0032350 Length:332 Species:Drosophila melanogaster
Sequence 2:NP_649579.2 Gene:CG1236 / 40708 FlyBaseID:FBgn0037370 Length:347 Species:Drosophila melanogaster


Alignment Length:306 Identity:91/306 - (29%)
Similarity:142/306 - (46%) Gaps:18/306 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VDKSCVELLEQHGIKVTYKLKLPV--EELCQEVKNFDAAIVRSDTKITAEVLAAGSGSLKVVGRA 76
            ||.|.:|||.:.....|:....||  .||.:.|...||.......|:..|||.|....||.|...
  Fly    36 VDDSGLELLRKSCQVSTWHETNPVPRSELIRVVAGKDALYCALTDKVDKEVLDAAGPQLKCVATI 100

  Fly    77 GAGVDNIDVPAATAQNVVVLNTPGGNSISACELTCILIGSLARPVVPAGQSMKEGRWDRKLYA-- 139
            ..|.|:|||.....:.:.|..||...:.:..|||..|:.:..|.:..|.:.:..|.|  |.:|  
  Fly   101 SVGYDHIDVEECRKRGIRVGFTPDVLTDATAELTLALLLATNRRLFEANKQVYNGGW--KSWAPM 163

  Fly   140 ---GTELYGKTLAVLGLGRIGREVAIRMKTWGMRIIGYDPITTEA----EAKAAGIEKMTLEEIW 197
               |..|.|..:.:||.||||:|:|.|:..:....|.|   ||.:    ||.|.....:..:|:.
  Fly   164 WMCGQGLKGSRVGLLGFGRIGQEIAARIVPFKPTEITY---TTRSLRPKEAAAVNARHVDFDEML 225

  Fly   198 PLADYITVHTPLIPATRNLISAETLAKCKQGVKVVNVARGGIIDEQAVLDGLESGKVAGAAFDVY 262
            ..:|.|.|...|.|.|:.:.:|....|.|....::|.||||::|::|:.:.|::.::..|..||.
  Fly   226 RESDLIVVCCALTPETKEIFNATAFQKMKPNCILINTARGGVVDQKALYEALKTKRILAAGLDVT 290

  Fly   263 PEEPPKSAVTKALISHPKVVATPHLGASTSEAQVRVAVEVAEQFIA 308
            ..||  ..:...|:....||..||:|::..|.:..::...|...:|
  Fly   291 TPEP--LPIDDPLLKLDNVVILPHIGSADIETRKEMSRITARNILA 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6287NP_609496.1 PGDH_4 7..311 CDD:240650 91/306 (30%)
CG1236NP_649579.2 GDH 27..338 CDD:240626 91/306 (30%)

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