DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6287 and PHGDH

DIOPT Version :10

Sequence 1:NP_609496.1 Gene:CG6287 / 34554 FlyBaseID:FBgn0032350 Length:332 Species:Drosophila melanogaster
Sequence 2:XP_011539528.1 Gene:PHGDH / 26227 HGNCID:8923 Length:607 Species:Homo sapiens


Alignment Length:399 Identity:175/399 - (43%)
Similarity:239/399 - (59%) Gaps:82/399 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NIRKVLVCDAVDKSCVELLEQHGIKVTYKLKLPVEELCQEVKNFDAAIVRSDTKITAEVLAAGSG 68
            |:||||:.|::|..|.::|:..|::|..|..|..|||..|:::.:..||||.||:||:|:.|.. 
Human     5 NLRKVLISDSLDPCCRKILQDGGLQVVEKQNLSKEELIAELQDCEGLIVRSATKVTADVINAAE- 68

  Fly    69 SLKVVGRAGAGVDNIDVPAATAQNVVVLNTPGGNSISACELTCILIGSLARPVV----------- 122
            .|:||||||.||||:|:.|||.:.::|:|||.|||:||.||||.:|..||||..           
Human    69 KLQVVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARPETFRDQEITFPMA 133

  Fly   123 -----PAG--------------------------------------------------------- 125
                 |||                                                         
Human   134 RPAFPPAGGGSGGIYLCSNSSLQFPSELSGPALFKGIGEMLWFKRSSPLSTAHHDLTHQRQIPQA 198

  Fly   126 -QSMKEGRWDRKLYAGTELYGKTLAVLGLGRIGREVAIRMKTWGMRIIGYDPITTEAEAKAAGIE 189
             .|||:|:|:||.:.||||.||||.:|||||||||||.||:::||:.||||||.:...:.:.|::
Human   199 TASMKDGKWERKKFMGTELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSASFGVQ 263

  Fly   190 KMTLEEIWPLADYITVHTPLIPATRNLISAETLAKCKQGVKVVNVARGGIIDEQAVLDGLESGKV 254
            ::.|||||||.|:|||||||:|:|..|::..|.|:||:||:|||.|||||:||.|:|..|:||:.
Human   264 QLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQC 328

  Fly   255 AGAAFDVYPEEPPKSAVTKALISHPKVVATPHLGASTSEAQVRVAVEVAEQFIALNGTSPKYTSY 319
            ||||.||:.||||:.   :||:.|..|::.|||||||.|||.|...|:|.||:.:    .|..|.
Human   329 AGAALDVFTEEPPRD---RALVDHENVISCPHLGASTKEAQSRCGEEIAVQFVDM----VKGKSL 386

  Fly   320 AGVINKEAL 328
            .||:|.:||
Human   387 TGVVNAQAL 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6287NP_609496.1 PGDH_4 7..311 CDD:240650 166/377 (44%)
PHGDHXP_011539528.1 PGDH_4 8..384 CDD:240650 167/383 (44%)
PGDH_inter 404..>481 CDD:437136
Blue background indicates that the domain is not in the aligned region.

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