DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gyc32E and GLUR2

DIOPT Version :10

Sequence 1:NP_001097148.1 Gene:Gyc32E / 34553 FlyBaseID:FBgn0010197 Length:1191 Species:Drosophila melanogaster
Sequence 2:NP_567981.1 Gene:GLUR2 / 829682 AraportID:AT4G35290 Length:912 Species:Arabidopsis thaliana


Alignment Length:543 Identity:113/543 - (20%)
Similarity:208/543 - (38%) Gaps:162/543 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 ILVLL----LLGCQRSNPLAAGATVSSMRRLTDT---INIGFLAEYSQMRVTLGGLPLAIEDVNK 71
            :||||    |:|   ...::.||.:..  |..|.   .::|.|    |..||...:..|.||||.
plant     4 VLVLLSFIVLIG---DGMISEGAGLRP--RYVDVGAIFSLGTL----QGEVTNIAMKAAEEDVNS 59

  Fly    72 NPNLLPGKKLAFKPVDIGHKMSAYRVK-----PLRAMTQMREAGVTAFIGPDESCTTEAL--LAS 129
            :|:.|.|.||         :::.|..|     .:....|..|....|.|||..|.....|  ||:
plant    60 DPSFLGGSKL---------RITTYDAKRNGFLTIMGALQFMETDAVAIIGPQTSIMAHVLSHLAN 115

  Fly   130 AWNTPMLSFKCSDPIVSNKSTFHTFARTLAPASKVSKSVISLLNAFHWNKFSIVVSSKPIWGSDV 194
            ..:.|||||...||.:| ...|..|.:|......:.:::..:::.:.|::...:.:.     .|.
plant   116 ELSVPMLSFTALDPSLS-ALQFPFFVQTAPSDLFLMRAIAEMISYYGWSEVIALYND-----DDN 174

  Fly   195 AR----AIQELAEARNFTISHFKYISDYIPTTKTLSQIDKIIEETYATTRIYVFIGEHIAMVDFV 255
            :|    |:.:..|.|...||:           |.:..:|.:|      |.....|.|.:.    :
plant   175 SRNGITALGDELEGRRCKISY-----------KAVLPLDVVI------TSPREIINELVK----I 218

  Fly   256 RGLQNRRLLESGDYIVVS----VDDEIYDSNRRVNIMERNYLDPYIRKEKSKS-LDKI------- 308
            :|:::|       .|:|:    ...:|::..:::.:||:.|:  :|......| ||.:       
plant   219 QGMESR-------VIIVNTFPKTGKKIFEEAQKLGMMEKGYV--WIATTWLTSLLDSVNPLPAKT 274

  Fly   309 --SFRSVIKISMTYPQNPHIRDICSKIKDYARKTPFLVPYHQRVFDNISVPIYGLHLYDSVMIYV 371
              |.|.|:.:.:..|.:             .:|..|:..:::.....:.:.:|||:.||:|.|..
plant   275 AESLRGVLTLRIHTPNS-------------KKKKDFVARWNKLSNGTVGLNVYGLYAYDTVWIIA 326

  Fly   372 RAITEV-----------------------LRLGG-DIYD-GNLVMSHIFNRSYHSIQGFDVYIDS 411
            ||:..:                       |.||. .|:| |:..:.:|.|.:...:.|...::..
plant   327 RAVKRLLDSRANISFSSDPKLTSMKGGGSLNLGALSIFDQGSQFLDYIVNTNMTGVTGQIQFLPD 391

  Fly   412 NGDAEGNYTVITLQNDVGSGASIGSLAKMSMQPVGFFA-YDKNSVI-PEFRYIK----------- 463
            ....:.:|.:|.:.:|             ..:.:|::: :...|:| ||..|.|           
plant   392 RSMIQPSYDIINVVDD-------------GFRQIGYWSNHSGLSIIPPESLYKKLSNRSSSNQHL 443

  Fly   464 ---------NDRPIQWL---NGR 474
                     ::.|..|:   |||
plant   444 NNVTWPGGTSETPRGWVFPNNGR 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc32ENP_001097148.1 PBP1_SAP_GC-like 44..448 CDD:380593 92/453 (20%)
PK_GC-A_B 550..832 CDD:270944
CYCc 865..1057 CDD:214485
GLUR2NP_567981.1 PBP1_GABAb_receptor_plant 31..422 CDD:380645 93/465 (20%)
GluR_Plant 466..804 CDD:270404 1/1 (100%)
Lig_chan 587..838 CDD:459656
Blue background indicates that the domain is not in the aligned region.

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