DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gyc32E and GLR5

DIOPT Version :9

Sequence 1:NP_001097148.1 Gene:Gyc32E / 34553 FlyBaseID:FBgn0010197 Length:1191 Species:Drosophila melanogaster
Sequence 2:NP_565744.1 Gene:GLR5 / 817801 AraportID:AT2G32400 Length:921 Species:Arabidopsis thaliana


Alignment Length:520 Identity:104/520 - (20%)
Similarity:197/520 - (37%) Gaps:134/520 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PCASAAAFSCILVLLLLGCQRSNPLAAGATVSSMRRLTDTINIGFLAEYSQM--RVTLGGLPLAI 66
            |..:..|...:::::.:.|||                ...:|||.:..:..:  |.....|..|:
plant     7 PSVAITALIVVILVVPMDCQR----------------PQLVNIGAVFAFDSVIGRAAKVALEAAV 55

  Fly    67 EDVNKNPNLLPGKKLAFKPVDIGHKMSAYRV-KPLRAMTQMREAGVTAFIGPDESCTTEAL--LA 128
            .|||.:.:.|...:|.....|     ||..| :......::.|..|.|.|||..|.....:  :|
plant    56 SDVNNDKSFLKETELRLLMED-----SACNVFRGSFGAFELLEKEVVAMIGPISSSVAHTISDIA 115

  Fly   129 SAWNTPMLSFKCSDPIVSNKSTFHTFARTLAPASKVSKSVISLLNAFHWNKFSIVVSSKPIWGSD 193
            ...:.|::||..:||.:| ...|..|.||....:....:::.|:|.:.|.:...|.|...:..:.
plant   116 KGLHFPLVSFAATDPTLS-ALQFPFFLRTTPNDAHQMSALVDLINFYGWKEVISVYSDDELGRNG 179

  Fly   194 VARAIQELAEAR---NFTI-----SHFKYISDYIPTTKTLSQIDKIIEETYATTRIYVFIGEHIA 250
            |:....||.:.|   ::.:     |..|::::.:..:|::.            .|:|:.   |..
plant   180 VSALDDELYKKRSRISYKVPLSVHSDEKFLTNALNKSKSIG------------PRVYIL---HFG 229

  Fly   251 MVDFVRGLQNRRLLESGDYIVVSVDDEIYDSNRRVNIMERNYLDPYIRKE-KSKSLDKISFRSVI 314
            ....:|                     |:|..:::.:|...|:  ::..: .|.:||.:|.:..:
plant   230 PDPLLR---------------------IFDIAQKLQMMTHEYV--WLATDWLSVTLDSLSDKGTL 271

  Fly   315 K-------ISMTYPQNPHIRDICSKIKDYARKTPFLVPYHQRVFDNISVPIYGLHLYDSVMIYVR 372
            |       :....|::..:.....|::                 .|.|:..|.||.||:|.:...
plant   272 KRLEGVVGLRQHIPESVKMEHFTHKLQ-----------------SNRSMNAYALHAYDTVWMIAH 319

  Fly   373 AITEVLRLGGDI---YDGNLVMSHIFNRSYHSIQGFDVYIDSNGD------AEGNYTVITLQNDV 428
            .|.|:|..|.:|   |...|:.:.........|:.|     ::|:      .:.|:|.|..|...
plant   320 GIEELLNEGINITFSYSEKLLHARGTKLHLEKIKFF-----NSGELLLEKLLKVNFTGIAGQVQF 379

  Fly   429 GSGAS-IG------SLAKMSMQPVGFFAYDKNS----VIPEFR-------YIKNDR--PIQWLNG 473
            |||.: ||      ::.|..:..|||  :.||.    |.|:.|       ::.:::  .|.|..|
plant   380 GSGRNVIGCDYEIINVNKTDVHTVGF--WSKNGGFSVVAPKTRHSQKKTSFVSDEKLGDITWPGG 442

  Fly   474  473
            plant   443  442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gyc32ENP_001097148.1 PBP1_Speract_GC_like 44..448 CDD:107365 90/440 (20%)
ANF_receptor 59..427 CDD:279440 78/395 (20%)
PHA02988 534..826 CDD:165291
PK_GC-A_B 550..832 CDD:270944
HNOBA <847..886 CDD:285003
CYCc 865..1057 CDD:214485
Guanylate_cyc 892..1076 CDD:278633
GLR5NP_565744.1 PBP1_GABAb_receptor 32..416 CDD:107361 93/451 (21%)
ANF_receptor 46..396 CDD:279440 83/415 (20%)
GluR_Plant 458..800 CDD:270404
Lig_chan 581..832 CDD:278489
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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