DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hgo and HGD

DIOPT Version :10

Sequence 1:NP_523544.2 Gene:hgo / 34552 FlyBaseID:FBgn0040211 Length:439 Species:Drosophila melanogaster
Sequence 2:NP_000178.2 Gene:HGD / 3081 HGNCID:4892 Length:445 Species:Homo sapiens


Alignment Length:435 Identity:292/435 - (67%)
Similarity:345/435 - (79%) Gaps:2/435 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEYKYLSGFGSHFSSEDERYPNSLPVGQNSPQVCPYKLYAEQLSGSAFTAPRTENMRTWLYRKL 65
            |:|.||:||||:..||||.|.|.|||.|||:||||||.||||||||||||.||:.|.|:||||.|
Human     1 MAELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWLYRIL 65

  Fly    66 PSAAHLPFQPFKGAEYFSQNWDEQPPNPNQLRWKPFDLPPKDGKNVNFVEGLHTVCGAGDPRSRH 130
            ||.:|.||:.....: .:.||||..|:|||||||||::|....|.|:||.||||:|||||.:|.:
Human    66 PSVSHKPFESIDEGQ-VTHNWDEVDPDPNQLRWKPFEIPKASQKKVDFVSGLHTLCGAGDIKSNN 129

  Fly   131 GLAIHIYSCNGSMDNSAFYNSDGDFLIVPQQGVLDITTEFGRMSVAPNEICVIPQGIRFAVNVDS 195
            ||||||:.||.||:|..|||||||||||||:|.|.|.||||:|.|.|||||||.:|:||:::|..
Human   130 GLAIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFE 194

  Fly   196 PSRGYILEVYDDHFVLPDLGPIGANGLANPRDFETPVAWFDDRDVK-DFQVISKFQGRLFVAKQN 259
            .:||||||||..||.||||||||||||||||||..|:||::||.|. .:.||:|:||:||.|||:
Human   195 ETRGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDRQVPGGYTVINKYQGKLFAAKQD 259

  Fly   260 HTVFDVVAWHGNYVPFKYDLSKFMVINSVSFDHCDPSIFTVLTCPSLRAGTAIADFVIFPPRWSV 324
            .:.|:||||||||.|:||:|..|||||||:|||.|||||||||..|:|.|.||||||||||||.|
Human   260 VSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTVLTAKSVRPGVAIADFVIFPPRWGV 324

  Fly   325 QEHTFRPPYYHRNCMSEFMGLILGKYEAKEDGFAAGGATLHSMMTPHGPDVKCFEGASNAKLVPE 389
            .:.|||||||||||||||||||.|.||||:.||..||.:|||.|||||||..|||.||..||.||
Human   325 ADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDADCFEKASKVKLAPE 389

  Fly   390 RVAEGTQAFMFESSLSLAVTKWGEETCQKLDAAYYECWQALKNNF 434
            |:|:||.||||||||||||||||.:..:.||..|::||:.||::|
Human   390 RIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHF 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hgoNP_523544.2 hmgA 3..434 CDD:273395 290/431 (67%)
HGDNP_000178.2 hmgA 3..434 CDD:273395 290/431 (67%)

Return to query results.
Submit another query.