DRSC/TRiP Functional Genomics Resources

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Protein Alignment hgo and hgo

DIOPT Version :10

Sequence 1:NP_523544.2 Gene:hgo / 34552 FlyBaseID:FBgn0040211 Length:439 Species:Drosophila melanogaster
Sequence 2:XP_318638.4 Gene:hgo / 1278983 VectorBaseID:AGAMI1_005199 Length:437 Species:Anopheles gambiae


Alignment Length:438 Identity:338/438 - (77%)
Similarity:377/438 - (86%) Gaps:3/438 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSEYKYLSGFGSHFSSEDERYPNSLPVGQNSPQVCPYKLYAEQLSGSAFTAPRTENMRTWLYRKL 65
            |.||:|||||||||||||.|:||:|||||||||.||:.||||||||||||||||||.|:||||..
Mosquito     1 MPEYQYLSGFGSHFSSEDARFPNALPVGQNSPQKCPHGLYAEQLSGSAFTAPRTENTRSWLYRIR 65

  Fly    66 PSAAHLPFQPFKGAEYF--SQNWDEQPPNPNQLRWKPFDLPPKDGKNVNFVEGLHTVCGAGDPRS 128
            ||..|.||:.|:|...|  ...|:||.|||||:||.|||||.. |..|:||.||||||||||.|:
Mosquito    66 PSVVHQPFKRFEGVAPFLRGTGWEEQHPNPNQMRWNPFDLPAA-GSEVDFVAGLHTVCGAGDVRA 129

  Fly   129 RHGLAIHIYSCNGSMDNSAFYNSDGDFLIVPQQGVLDITTEFGRMSVAPNEICVIPQGIRFAVNV 193
            |:|||:|:|..|.||.::||||||||.|||||||.|||||||||:.|.|||||||||||||:|.:
Mosquito   130 RNGLAVHVYLANCSMKDTAFYNSDGDMLIVPQQGPLDITTEFGRLYVKPNEICVIPQGIRFSVAL 194

  Fly   194 DSPSRGYILEVYDDHFVLPDLGPIGANGLANPRDFETPVAWFDDRDVKDFQVISKFQGRLFVAKQ 258
            :.|||||||||||.||.||||||||||||||||||.||.|.|:||.|:.::::|||||.||||.|
Mosquito   195 EGPSRGYILEVYDGHFRLPDLGPIGANGLANPRDFLTPTAHFEDRSVEGYRIVSKFQGALFVATQ 259

  Fly   259 NHTVFDVVAWHGNYVPFKYDLSKFMVINSVSFDHCDPSIFTVLTCPSLRAGTAIADFVIFPPRWS 323
            .|:.||||||||||||:||||::||||||||||||||||||||||||.|.|||||||||||||||
Mosquito   260 GHSPFDVVAWHGNYVPYKYDLARFMVINSVSFDHCDPSIFTVLTCPSNRPGTAIADFVIFPPRWS 324

  Fly   324 VQEHTFRPPYYHRNCMSEFMGLILGKYEAKEDGFAAGGATLHSMMTPHGPDVKCFEGASNAKLVP 388
            |||||||||||||||||||||||.|:|||||.||..|||:|||||||||||.:||||||||.|.|
Mosquito   325 VQEHTFRPPYYHRNCMSEFMGLIFGRYEAKEGGFMPGGASLHSMMTPHGPDHRCFEGASNADLKP 389

  Fly   389 ERVAEGTQAFMFESSLSLAVTKWGEETCQKLDAAYYECWQALKNNFQI 436
            ||||:||||||||||||:|||:|||||||||||.||||||||:.:|.:
Mosquito   390 ERVADGTQAFMFESSLSMAVTRWGEETCQKLDARYYECWQALEKHFHL 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hgoNP_523544.2 hmgA 3..434 CDD:273395 336/432 (78%)
hgoXP_318638.4 hmgA 3..435 CDD:273395 336/433 (78%)

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