DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4751 and AMSH2

DIOPT Version :10

Sequence 1:NP_609495.1 Gene:CG4751 / 34551 FlyBaseID:FBgn0032348 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_172530.2 Gene:AMSH2 / 837603 AraportID:AT1G10600 Length:223 Species:Arabidopsis thaliana


Alignment Length:247 Identity:54/247 - (21%)
Similarity:80/247 - (32%) Gaps:80/247 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 HDANMLIESVPFTSVGKLQPFLITVNSSALLLADFHCHLTVR-----------------EVCGYL 309
            |.:.:||......:.|:        :|.|.:|.|  .|::.|                 |.||.|
plant    23 HVSRVLISGTDNINHGE--------SSEAKILRD--VHISERLLEDFTELARENTEKDLETCGTL 77

  Fly   310 GGTWDMN---THTLSITKTYPCRSTRFDRQRAGEVERDIQKMMIQDQLLLVGWYHSHPKFQAEPT 371
            ....:..   ..||.|.|.   .||....|...|||  :..:..:.:|..|||.|:||......:
plant    78 AAFLERGIFYVTTLIIPKQ---ESTSNSCQAMNEVE--VFSIQNERELYPVGWIHTHPSQGCFMS 137

  Fly   372 LRDCDAQLDYQIKMRGASDLTYTPCVSLIISPYYDENPTLESVVKCIWIVPPNENRQSMEYGRPM 436
            ..|......||:.:..|..:                            :|.|.::.:|  ||...
plant   138 SVDLHTHYSYQVMVPEAFAI----------------------------VVAPTDSSKS--YGIFK 172

  Fly   437 LMQ---YSVL---------PDKEIPEEVRSEIQLCVDYY--SQYRSEMVKFR 474
            |..   ..||         |.|| ||:.....:.|.:.|  |..|.|:...|
plant   173 LTDPGGMEVLRGCSETGFHPHKE-PEDGNPVYEHCSNVYKNSNLRFEIFDLR 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4751NP_609495.1 RAMA 124..220 CDD:465856
MPN_2A_DUB 278..463 CDD:163698 45/216 (21%)
PHA03247 <616..741 CDD:223021
AMSH2NP_172530.2 MPN_AMSH_like 46..223 CDD:163697 47/214 (22%)
Blue background indicates that the domain is not in the aligned region.

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