DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4751 and Stambpl1

DIOPT Version :10

Sequence 1:NP_609495.1 Gene:CG4751 / 34551 FlyBaseID:FBgn0032348 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_083958.3 Gene:Stambpl1 / 76630 MGIID:1923880 Length:436 Species:Mus musculus


Alignment Length:264 Identity:60/264 - (22%)
Similarity:95/264 - (35%) Gaps:78/264 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 KYKGKKLDAYKNTYLRKCALQKETPLDDCELDAE-------------------RKTDTPEIVVKR 247
            |||.:.|...::..|.:...|:...:...:|::|                   |..|:| ::.::
Mouse   142 KYKAEILKKLEHQRLIEAERQRIAQMRQQQLESEQFLFFEDQLKKQELARGQIRGQDSP-VLSEQ 205

  Fly   248 T-------VFAHNTVSNRNVVHD-------ANMLIESVPFTSVGKLQPFLITVNS---------- 288
            |       ...|.:.|.||...|       :|....|.|.....|....|..|.:          
Mouse   206 TDGSALSCFSTHQSNSLRNAFADHPHKSDGSNFANYSPPVNRALKPAATLSAVQNLVVEGLRCVV 270

  Fly   289 -------SALLLADFHCHLTVR--EVCGYLGGTWDMNTHTLSITKTYPCRSTRFDRQRAG----E 340
                   ..|||||.:   |||  |.||.|.|....|..|::        .....:|.||    :
Mouse   271 LSRDLCHKFLLLADSN---TVRGIETCGILCGKLTHNEFTIT--------HVVVPKQSAGPDYCD 324

  Fly   341 VERDIQKMMIQDQ--LLLVGWYHSHPKFQAEPTLRDCDAQLDYQIKMRGASDLTYTPCVSLIISP 403
            ||...:...:|||  ||.:||.|:||...|..:..|......||:.:..|        ::::.||
Mouse   325 VENVEELFNVQDQHGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEA--------IAIVCSP 381

  Fly   404 YYDE 407
            .:.:
Mouse   382 KHKD 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4751NP_609495.1 RAMA 124..220 CDD:465856 5/17 (29%)
MPN_2A_DUB 278..463 CDD:163698 40/155 (26%)
PHA03247 <616..741 CDD:223021
Stambpl1NP_083958.3 USP8_dimer 28..132 CDD:462647
HlpA <101..>176 CDD:442073 7/33 (21%)
MPN_AMSH_like 266..436 CDD:163697 37/139 (27%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 347..360 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.