DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4751 and CSN5

DIOPT Version :10

Sequence 1:NP_609495.1 Gene:CG4751 / 34551 FlyBaseID:FBgn0032348 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_477442.1 Gene:CSN5 / 42000 FlyBaseID:FBgn0027053 Length:327 Species:Drosophila melanogaster


Alignment Length:388 Identity:78/388 - (20%)
Similarity:129/388 - (33%) Gaps:122/388 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 DAERKTDTPEIVVKR-----TVFAHNTVSNRNVVHDANMLIESVPFTSVGKLQPFLITVNSSALL 292
            ||.:||...|..::.     .:|.::....|.:       |::.|:.   |...|...:..|||.
  Fly     4 DAAQKTWELENNIQTLPSCDEIFRYDAEQQRQI-------IDAKPWE---KDPHFFKDIKISALA 58

  Fly   293 LADFHCHLT---VREVCGYLGGTWDMNTHTLSITKTYPCR--STRFDRQRAG--------EVERD 344
            |.....|..   ..||.|.:.|..:.||..:......|..  .||.:.|...        |..::
  Fly    59 LLKMVMHARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQAYEYMTAYMEAAKE 123

  Fly   345 IQKMMIQDQLLLVGWYHSHPKFQAEPTLRDCDAQLDYQIKMRGASDLTY-TPCVSLIISPYYDEN 408
            :.:|.     ..||||||||.:....:..|...|:..|         || .|.|::::.|.    
  Fly   124 VGRME-----HAVGWYHSHPGYGCWLSGIDVSTQMLNQ---------TYQEPFVAIVVDPV---- 170

  Fly   409 PTLESVVKCIWIV--------PPNENRQSMEYGRPMLMQYSVLPDKEIPEEVRSEIQLCVDYY-- 463
            .|:.:...|:...        ||||...          :|..:|..:| |:....   |..||  
  Fly   171 RTVSAGKVCLGAFRTYPKGYKPPNEEPS----------EYQTIPLNKI-EDFGVH---CKQYYPL 221

  Fly   464 --SQYRSEMVKFRNIYNNDVTYNEKLKNTLYPKFPSKQSDKALWNWICAVLDCEQEDDFIPPKTI 526
              |.::|.:             :.:|.::|:.|:           |                  :
  Fly   222 EISYFKSAL-------------DRRLLDSLWNKY-----------W------------------V 244

  Fly   527 KIIDNDDLEVKEEDKPVVLMDLSGDVKINPPKEEQFSEAMGGLEDSGRKAEEESNAQAEQKAS 589
            ..:.:..|....|.....:||||       .|.||....:|...|...|..|:..::|.:..|
  Fly   245 NTLGSSGLLTNTEYTTGQIMDLS-------EKLEQSENFLGRGTDVNEKRSEDKLSKATRDCS 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4751NP_609495.1 RAMA 124..220 CDD:465856
MPN_2A_DUB 278..463 CDD:163698 46/206 (22%)
PHA03247 <616..741 CDD:223021
CSN5NP_477442.1 MPN_RPN11_CSN5 41..305 CDD:163700 70/344 (20%)
Blue background indicates that the domain is not in the aligned region.

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