DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4751 and eIF3f2

DIOPT Version :10

Sequence 1:NP_609495.1 Gene:CG4751 / 34551 FlyBaseID:FBgn0032348 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster


Alignment Length:222 Identity:49/222 - (22%)
Similarity:83/222 - (37%) Gaps:71/222 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   356 LVGWYHSHPKFQAEPTL------RDC----------DAQLDYQ---------IKM---RGASDLT 392
            ::||:.:........:|      |:|          ||.|..|         ::|   .|...|.
  Fly    91 VLGWFCTGKSVSRSASLIHDYYVRECCEGQPLHLLVDAALKNQRLSTRLYCAVEMGVPGGTKGLM 155

  Fly   393 YTPCVSLIISPYYDENPTLESVVKCIWIVPPNENRQSMEYGRPMLMQYSVLPDKEIPEEVRSEIQ 457
            :: .|.|.||   :||..|.: ::||       .:||.:       |.|...::.:| |:...:.
  Fly   156 FS-LVPLEIS---NENSDLVA-LRCI-------EKQSQQ-------QASKQMERFVP-ELAQVVD 200

  Fly   458 LCVDYYSQYRSEMVKFRNIYNNDVTYNEK-----LKNTLYPKF---PSKQSDK--ALWNWICAVL 512
            ...|  .|:|.::| .|  |.|||...:|     :..:||...   |...|||  .::|      
  Fly   201 ATRD--MQHRLDLV-LR--YINDVLARKKKPDNVVGRSLYAALTAVPLLDSDKFRVMFN------ 254

  Fly   513 DCEQEDDFIPPKTIKIIDNDDLEVKEE 539
              ....|.:...|:..:....||:.|:
  Fly   255 --TNLRDMLMAITLSTMIKTQLEISEK 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4751NP_609495.1 RAMA 124..220 CDD:465856
MPN_2A_DUB 278..463 CDD:163698 28/134 (21%)
PHA03247 <616..741 CDD:223021
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 49/222 (22%)
Blue background indicates that the domain is not in the aligned region.

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