DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4751 and Psmd7

DIOPT Version :10

Sequence 1:NP_609495.1 Gene:CG4751 / 34551 FlyBaseID:FBgn0032348 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_001100896.1 Gene:Psmd7 / 307821 RGDID:1306902 Length:320 Species:Rattus norvegicus


Alignment Length:406 Identity:69/406 - (16%)
Similarity:117/406 - (28%) Gaps:172/406 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 PEIVVKRTVFAHNTVSNRNVVHDANMLIESVPFTSVGKLQPFLITVNSSALLLADFHCHLTVREV 305
            ||:.|::.           |||...:|.....|..:||:.                    ..:.|
  Rat     2 PELAVQKV-----------VVHPLVLLSVVDHFNRIGKVG--------------------NQKRV 35

  Fly   306 CGYLGGTWDMNTHTLSITKTYPCRSTRFDRQRAGE----VERDIQKMM------IQDQLLLVGWY 360
            .|.|.|:|......:|.:...|     ||.....:    ::.|..:.|      :..:..:||||
  Rat    36 VGVLLGSWQKKVLDVSNSFAVP-----FDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWY 95

  Fly   361 HSHPKFQA------EPTLRDCDAQ----LDYQIKMRGASDLTYTPCVSLIISPYYDE----NPTL 411
            |:.||...      |...|.|...    :|.:.|..|.....|     :.:...:|:    :.|.
  Rat    96 HTGPKLHKNDIAINELMKRYCPNSVLVIIDVKPKDLGLPTEAY-----ISVEEVHDDGTPTSKTF 155

  Fly   412 ESVVKCIWIVPPNENRQSMEYGRPMLMQ------------------------------------- 439
            |.|...|..      .::.|.|...|::                                     
  Rat   156 EHVTSEIGA------EEAEEVGVEHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRTYLEK 214

  Fly   440 -------------------YSVLPDKEIPEEV-----RSEIQLCVDYYSQYRSEMVKFRNIYNND 480
                               :::|||..:.|.|     ::..|:.|.|.:.....:|...|:.||.
  Rat   215 VASGKLPINHHIIYQLQDVFNLLPDASLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNK 279

  Fly   481 VTYNEKLKNTLYPKFPSKQSDKALWNWICAVLDCEQEDDFIPPKTIKIIDNDDLEVKEEDKPVVL 545
            :...:..|.....|..||:               |::||                 ||::|    
  Rat   280 IANRDAEKKEGQEKEESKK---------------ERKDD-----------------KEKEK---- 308

  Fly   546 MDLSGDVKINPPKEEQ 561
                .|.|....||::
  Rat   309 ----SDAKKEEKKEKK 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4751NP_609495.1 RAMA 124..220 CDD:465856
MPN_2A_DUB 278..463 CDD:163698 41/269 (15%)
PHA03247 <616..741 CDD:223021
Psmd7NP_001100896.1 MPN_RPN7_8 7..285 CDD:163693 52/324 (16%)
Blue background indicates that the domain is not in the aligned region.

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