DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4751 and Cops6

DIOPT Version :10

Sequence 1:NP_609495.1 Gene:CG4751 / 34551 FlyBaseID:FBgn0032348 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_036132.1 Gene:Cops6 / 26893 MGIID:1349439 Length:324 Species:Mus musculus


Alignment Length:293 Identity:78/293 - (26%)
Similarity:118/293 - (40%) Gaps:80/293 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VNVTEFPHMAVLG--WKVEELGEGA----DSGDDGAGVRWQ--------------CGGSLITLRF 106
            |.|.||..:.:.|  .:::..|:..    :.|||.....|.              ||||||...:
Mouse     7 VYVGEFLLLNIAGALCQLDVCGQAPLNNNNGGDDAVAGSWPWQASIHRISPEDHICGGSLINKDW 71

  Fly   107 VLTAAHC---AADANNIPPRLVRLGDVNLASTKDDAYAQQFD-----------ILRIVRHPEHRF 157
            ||:||||   .|.||    ..:.||             :||.           :.:||.||::..
Mouse    72 VLSAAHCFMITATAN----IKIFLG-------------RQFQTGSNPNEISRTLTQIVIHPDYST 119

  Fly   158 SRKYFDLALVELDGVVRLTEGVCPTCLWTNSKVLPAQFFQTAGFGEITLGGGS---------VPT 213
            :.:..|:||:.|...|..|:.:.|.||.:...|.       ||..:..:.|..         ...
Mouse   120 TTQNNDIALLRLSSSVTFTDYIRPVCLASADSVF-------AGGTKSWITGWDKHRSSDIQVTNV 177

  Fly   214 LLKTALSATDSTECSESFKYTRGLPEGIRHDQVCASMLNA--DTCQGDSGGPLQVSLRSYSTEHP 276
            |.:..|....:|||:..:|   |:   |..:.:||.:...  |.||||||||:.    |.:....
Mouse   178 LQEVQLPVVSNTECNADYK---GI---ITDNMICAGINEGGKDACQGDSGGPMV----SQNGSRW 232

  Fly   277 FLVALTSFGRGCGIGS-SGVYQQVAAHIPWIES 308
            ....:.||||.||:.. .|:|.:|:.:..||.|
Mouse   233 IQSGIVSFGRECGLPRYPGIYTRVSQYQSWITS 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4751NP_609495.1 RAMA 124..220 CDD:465856 22/115 (19%)
MPN_2A_DUB 278..463 CDD:163698 12/32 (38%)
PHA03247 <616..741 CDD:223021
Cops6NP_036132.1 MPN_CSN6 36..318 CDD:163694 72/264 (27%)
Blue background indicates that the domain is not in the aligned region.

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