DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4751 and Smarcc1

DIOPT Version :10

Sequence 1:NP_609495.1 Gene:CG4751 / 34551 FlyBaseID:FBgn0032348 Length:1412 Species:Drosophila melanogaster
Sequence 2:NP_033237.2 Gene:Smarcc1 / 20588 MGIID:1203524 Length:1104 Species:Mus musculus


Alignment Length:1199 Identity:209/1199 - (17%)
Similarity:381/1199 - (31%) Gaps:368/1199 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 GGTWDMNTHTLSITKTYPCRS--TRFDRQRAGEVERDIQKMMIQDQLLLVGWYHSHPKFQAEPTL 372
            |||.   .|.|.....|....  .|||.|....::|:::..|..::.|:.....:.|.....|  
Mouse   114 GGTL---CHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIP-- 173

  Fly   373 RDCDAQLDYQIKMRGASDL------TYT---PCVSLIISPYYDENPTLESVVKCIWIVPPNENRQ 428
             |.|.:|..::|     |:      |:|   ...|..|.||.......|      |:      |.
Mouse   174 -DIDLKLANKLK-----DIIKRHQGTFTDEKSKASHHIYPYPSSQEDEE------WL------RP 220

  Fly   429 SMEYGRPMLMQYSVLPDKEIPEEVRSEIQLCVDYYSQYRSEMVKFRNIYNNDVTYNEKLKNTLYP 493
            .|...:.:|:.:...||.                |..:         :::|||  :.::::...|
Mouse   221 VMRRDKQVLVHWGFYPDS----------------YDTW---------VHSNDV--DAEIEDAPIP 258

  Fly   494 KFPSKQSDKALWNWICAVLDCEQEDDFIPPKTIKIIDNDDLEVKEEDKPVVL---MDLSGDVKIN 555
            :.|.|...|    ||   ||.:..:::        ::.:|.||.|..|||..   :....:..:.
Mouse   259 EKPWKVHVK----WI---LDTDVFNEW--------MNEEDYEVDENRKPVSFRQRISTKNEEPVR 308

  Fly   556 PPKEEQFSEAMGGLE-------------DSGRKAEEESNAQAEQKASELKVMSLQEQLCMPSGLN 607
            .|:......:....:             :|.:|:.::..|....|....|....||.|       
Mouse   309 SPERRDRKASANSRKRKPSPSPPPPTATESRKKSGKKGQASLYGKRRSQKEEDEQEDL------- 366

  Fly   608 MNPVRMLSPLATPNPTSLPPVLPNLGAPVLPATPSQLLPPQVPAVTAPPAITPAVTTSALTSALN 672
                  ...:..|.|      :||:...|||..    :.|:..:...|       ......:.|:
Mouse   367 ------TKDMEDPTP------VPNIEEVVLPKN----VNPKKDSENTP-------VKGGTVADLD 408

  Fly   673 ASPRDSPITIQSNSASPAKFEVPVRASPSPAKS-DTSSHASTSRTRNSPAPSPGKF----SVSDI 732
            ....::..|.......|:|.:        |::| |......|.:|.:...||...:    .:..|
Mouse   409 EQDEEAVTTGGKEDEDPSKGD--------PSRSVDPGEDNVTEQTNHIIIPSYASWFDYNCIHVI 465

  Fly   733 AR---------NSPSITPNKYEAAAAALVP----------PAAACLPTANDLMAASLAQLAGQLP 778
            .|         .:.|.||..|.|....::.          .:.||...                 
Mouse   466 ERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRN----------------- 513

  Fly   779 PNFLQGDLAALFQQQRKDYGSSSLNQLAAAAAKVGGSKQSN-------------ASASSG----- 825
               |.||:.|:.:..      :.|.|......:|....:..             |...||     
Mouse   514 ---LTGDVCAVMRVH------AFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLH 569

  Fly   826 LNDPNVAAAVAAYSNSFNMPLPTGVGIGGSGNSNAHSSSKSKSE-------------RSSKSSSS 877
            |..|.|.||    ....|.|                  .|:|.:             .|.|:.:.
Mouse   570 LRSPQVPAA----QQMLNFP------------------EKNKEKPIDLQNFGLRTDIYSKKTLAK 612

  Fly   878 SSSSNSSSTSNSYKTKLMKE-LDELKNDPLKMSELIRSPEYAALLLQQAEALGATTLGTLGFGSD 941
            |..:::.......:|.|:.| |:..|:|..|:||.:.|......:|....         |.....
Mouse   613 SKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLR---------LPIEDP 668

  Fly   942 YSYLTGAGLGVPAANALTGGQSSNSSSSK----SSKSSPAAAAAAALSA--DYNNLIQASKLLGY 1000
            |...:.|.||..|...:...||.|...|.    :|...|..|:|||.:|  :::.:.:...|...
Mouse   669 YLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELV 733

  Fly  1001 DSYMQQSKQSNDLNAFLQQQMAVAAASIPPPPQTASS---GSSNSSSSK----KQQQLQQQQHQQ 1058
            ::::::           .|:.|.|:..:.|.....||   |:......|    ::::::.....|
Mouse   734 EAHVKK-----------VQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGSEEEKMETDPDGQ 787

  Fly  1059 QQQQQQQQAAAQADYTALLQTYTKLFDPNNQFAAAMSSNKHMAGAHNELSALLSSGVGVGGGASG 1123
            |.::.:.:...::|      ...|:.|..|:                                  
Mouse   788 QPEKAENKVENESD------EGDKIQDRENE---------------------------------- 812

  Fly  1124 GGSKQKQKDIQSDMLNQLLQLEKQDSEIKALLYRQNKAAADLDALFATPSGAVVGAGSSANAMKS 1188
               |..:|:..||:...:...||::.|.|.|.....:..:|              ||.  ..::.
Mouse   813 ---KNTEKEQDSDVSEDVKPEEKENEENKELTDTCKERESD--------------AGK--KKVEH 858

  Fly  1189 GSSAGNSGVSGMSSPSSLSNQAAYYNALAQEKMQDYAAFFQQQHGKYGIPDPLSKTTLAANN--- 1250
            ..|.||...:..::.:|.:.:|.:..|:.:.|::...|..        :...:.|..:...:   
Mouse   859 EISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALL--------VETQMKKLEIKLRHFEE 915

  Fly  1251 ----MFMTPSALFKIQQESLSAMMMKPPKSTTPSSARTRESSASPALERLTPTKS-ASSGGSGGG 1310
                |.....||.:.:|:.|:.......:....:..|.|:..........||.:: ..:||.|..
Mouse   916 LETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQQHGQTPQQAHQHTGGPGMA 980

  Fly  1311 --GSNSNSGGKYNFSAVDLAISSVPSNTPSPAPSDGSSGSSHRRPSPDIGRLYGELAPPGALLGS 1373
              |:..:.|             .:|...|.|.|.     ..|:.|.|...: .|::..||:::..
Mouse   981 PLGATGHPG-------------MMPHQQPPPYPL-----MHHQMPPPHPPQ-PGQIPGPGSMMPG 1026

  Fly  1374 GGVPKKRMEFASVADL----AAPPPAKMP 1398
            ..:| .||..|..|::    :.|.|..||
Mouse  1027 QPMP-GRMIPAVAANIHPTGSGPTPPGMP 1054

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4751NP_609495.1 RAMA 124..220 CDD:465856
MPN_2A_DUB 278..463 CDD:163698 33/163 (20%)
PHA03247 <616..741 CDD:223021 23/138 (17%)
Smarcc1NP_033237.2 MarR-like, BRCT and chromo domains module. /evidence=ECO:0000255|PROSITE-ProRule:PRU01376 27..301 52/251 (21%)
SWIRM-assoc_2 31..444 CDD:465143 78/432 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..445 26/187 (14%)
RSC8 443..>709 CDD:227584 57/322 (18%)
SWIRM-assoc_3 705..771 CDD:465145 14/76 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 744..859 25/173 (14%)
SWIRM-assoc_1 882..953 CDD:465142 9/78 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 955..1021 15/84 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1041..1104 4/14 (29%)
Blue background indicates that the domain is not in the aligned region.

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