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Protein Alignment RfC38 and RAD24
DIOPT Version :9
Sequence 1: | NP_001285833.1 |
Gene: | RfC38 / 34550 |
FlyBaseID: | FBgn0028700 |
Length: | 356 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_011100.1 |
Gene: | RAD24 / 856920 |
SGDID: | S000000975 |
Length: | 659 |
Species: | Saccharomyces cerevisiae |
Alignment Length: | 87 |
Identity: | 22/87 - (25%) |
Similarity: | 41/87 - (47%) |
Gaps: | 12/87 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 WVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPH-----LMFYGPSGAGKKTRIMCLLREMYGSG 63
|.:|::|..|.::..||.:.::::........|: |:..||||..|.| :::|:....
Yeast 66 WYEKFKPNCLEQVAIHKRKLKDVQEALDAMFLPNAKHRILLLSGPSGCSKST----VIKELSKIL 126
Fly 64 VERLRSE---TMTFTTPSNRKV 82
|.:.|.. |...:||:..||
Yeast 127 VPKYRQNSNGTSFRSTPNEHKV 148
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
RfC38 | NP_001285833.1 |
rfc |
3..345 |
CDD:234763 |
22/87 (25%) |
RAD24 | NP_011100.1 |
rad24 |
1..634 |
CDD:129690 |
22/87 (25%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0470 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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