Protein Alignment RfC38 and CTF18

DIOPT Version :10

• Sequence 1: NP_609494.1
• Gene: RfC38 / 34550
• FlyBaseID: FBgn0028700
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_013795.1
• Gene: CTF18 / 855102
• SGDID: S000004683
• Length: 741
• Species: Saccharomyces cerevisiae
• Alignment Length: 357
• Identity: 68/357 - (19%)
• Similarity: 141/357 - (39%)
• Gaps: 88/357 - (24%)

  Fly     3 LWVDKYRPR-----------------------------ELSKLDFHKDQAENLRNLCKQSDFPHL 38
            |||:|:||:                             :|.||...|:.::...:..|:.....|
Yeast   115 LWVEKWRPKKFLDLVGNEKTNRRMLGWLRQWTPAVFKEQLPKLPTEKEVSDMELDPLKRPPKKIL 179

  Fly    39 MFYGPSGAGKKTRIMCLLREMYGSGVERL-----RSETMTFTTPSNRKVEVMTVSSNYHLEVNP- 97
            :.:||.|.| ||.:..::.:..|..|..:     |:..|.       |.::..:..|:..:.||
Yeast   180 LLHGPPGIG-KTSVAHVIAKQSGFSVSEINASDERAGPMV-------KEKIYNLLFNHTFDTNPV 236

  Fly    98 -SDAGMYDRTVVIDLIKQVAQTHQIEISGQREFKVIVISEGDELTKDAQHALRRTMEKYVATCRI 161
             ..|...|.::....|:.:....|.:|....:   ::..:.|:  ||.:...:|:  |.:....|
Yeast   237 CLVADEIDGSIESGFIRILVDIMQSDIKATNK---LLYGQPDK--KDKKRKKKRS--KLLTRPII 294

  Fly   162 IISVNSTSRIIPAIRSRCLGIRVAAPNETEIVSILQNTCKREGLALPVELAKRVVDKSERNLRRA 226
            .|..|..:..:..::..|..|.|..|::|.::..|...|.:|.:.:|::....::|.::.::|..
Yeast   295 CICNNLYAPSLEKLKPFCEIIAVKRPSDTTLLERLNLICHKENMNIPIKAINDLIDLAQGDVRNC 359

  Fly   227 L--LMLEAAKV-------------AKAPFTANQEIPDLDW-----QVFLRETASQIISEQTPAKL 271
            :  |...|:.|             ||..:.::.:...:.|     |:|.::          |.:
Yeast   360 INNLQFLASNVDSRDSSASDKPACAKNTWASSNKDSPISWFKIVNQLFRKD----------PHR- 413

  Fly   272 EKIRERLYELLTQGVPPNLIFRGLVEQLVNNC 303
             .|:|:.||||.|     :...|..::::..|
Yeast   414 -DIKEQFYELLNQ-----VELNGNSDRILQGC 439

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC38	NP_609494.1	rfc	3..345	CDD:234763	68/357 (19%)
CTF18	NP_013795.1	PRK04195	116..>422	CDD:235250	61/332 (18%)