DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment RfC38 and RFC4

DIOPT Version :9

Sequence 1:	NP_001285833.1	Gene:	RfC38 / 34550	FlyBaseID:	FBgn0028700	Length:	356	Species:	Drosophila melanogaster
Sequence 2:	NP_014547.1	Gene:	RFC4 / 854059	SGDID:	S000005454	Length:	323	Species:	Saccharomyces cerevisiae

Alignment Length:	240	Identity:	65/240 - (27%)
Similarity:	117/240 - (48%)	Gaps:	50/240 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 WVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREM----YGSGV 64
            ||:||||:.||.:..:|:..:.|:.:.|..:.||::..|..|.||.|.:.||..|:    |..||
Yeast    11 WVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGV 75

  Fly    65 ERLRSETMTFTTPSNRKVEVMTVSSNYHLEVNPSDAGMYDRTVVIDLIKQVAQTHQIEISGQREF 129
                                        ||:|.||    ||.  ||:::     :||:...|::.
Yeast    76 ----------------------------LELNASD----DRG--IDVVR-----NQIKHFAQKKL 101

  Fly   130 -------KVIVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAP 187
                   |::::.|.|.:|..||.|||||||.|..:.|...:.|.:::||..::|||..:|.:..
Yeast   102 HLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSRCAILRYSKL 166

  Fly   188 NETEIVSILQNTCKREGLALPVELAKRVVDKSERNLRRALLMLEA 232
            ::.:::..|....|.|.:....:..:.::..:|.::|:|:..|::
Yeast   167 SDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQS 211

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RfC38	NP_001285833.1	rfc	3..345	CDD:234763	65/240 (27%)
RFC4	NP_014547.1	PLN03025	9..323	CDD:178596	65/240 (27%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810