Sequence 1: | NP_001285833.1 | Gene: | RfC38 / 34550 | FlyBaseID: | FBgn0028700 | Length: | 356 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_009644.3 | Gene: | RFC5 / 852383 | SGDID: | S000000291 | Length: | 354 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 350 | Identity: | 143/350 - (40%) |
---|---|---|---|
Similarity: | 215/350 - (61%) | Gaps: | 10/350 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MALWVDKYRPRELSKLDFHKDQAENLRNLCKQ-SDFPHLMFYGPSGAGKKTRIMCLLREMYGSGV 64
Fly 65 ERLRSETMTFTTPSNRKVEVMTVSSNYHLEVNPSDAGMYDRTVVIDLIKQVAQTHQIEISGQRE- 128
Fly 129 ----FKVIVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNE 189
Fly 190 TEIVSILQNTCKREGLALPV-ELAKRVVDKSERNLRRALLMLEA-AKVAKAPFTANQEIPDLDWQ 252
Fly 253 VFLRETASQIISEQTPAKLEKIRERLYELLTQGVPPNLIFRGLVEQL--VNNCDMSIKAKTLEFA 315
Fly 316 TEYEHRMQSGAKHIFHLEAFVAQFM 340 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RfC38 | NP_001285833.1 | rfc | 3..345 | CDD:234763 | 141/347 (41%) |
RFC5 | NP_009644.3 | PRK12402 | 3..>243 | CDD:237090 | 112/239 (47%) |
HolB | 161..351 | CDD:223546 | 63/189 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C157343861 | |
Domainoid | 1 | 1.000 | 151 | 1.000 | Domainoid score | I935 |
eggNOG | 1 | 0.900 | - | - | E1_COG0470 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2188 | |
Inparanoid | 1 | 1.050 | 256 | 1.000 | Inparanoid score | I644 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S603 |
OMA | 1 | 1.010 | - | - | QHG53642 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004648 | |
OrthoInspector | 1 | 1.000 | - | - | oto99257 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102480 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11669 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1091 |
SonicParanoid | 1 | 1.000 | - | - | X3265 | |
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.740 |