Protein Alignment RfC38 and RFC2

DIOPT Version :10

• Sequence 1: NP_609494.1
• Gene: RfC38 / 34550
• FlyBaseID: FBgn0028700
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_176504.1
• Gene: RFC2 / 842620
• AraportID: AT1G63160
• Length: 333
• Species: Arabidopsis thaliana
• Alignment Length: 336
• Identity: 91/336 - (27%)
• Similarity: 157/336 - (46%)
• Gaps: 58/336 - (17%)

  Fly     4 WVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMYGSGVERLR 68
            ||:||||.::..:..::|....|:.:.:..:.|:|:..||.|.||.|.|:.|..|:.|
plant    17 WVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLG------- 74

  Fly    69 SETMTFTTPSNRKVEVMTVSSNYHLEVNPSDAGMYDR--TVVIDLIKQVAQTHQIEISGQREFKV 131
                     :|.|..|        ||:|.||    ||  .||.:.||..||.......|:.  ||
plant    75 ---------TNYKEAV--------LELNASD----DRGIDVVRNKIKMFAQKKVTLPPGRH--KV 116

  Fly   132 IVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETEIVSIL 196
            :::.|.|.:|..||.|||||:|.|..:.|..::.|::::||..|:|||..:|.:..::.:|:..|
plant   117 VILDEADSMTSGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRL 181

  Fly   197 QNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPFT----ANQE----IPDLDWQV 253
            ......|.:....|..:.::..::.::|:||..|:|.      |:    .|||    :.|....:
plant   182 LVVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQAT------FSGFSFVNQENVFKVCDQPHPL 240

  Fly   254 FLRETASQIISEQTPAKLEKIRERLYELLTQGVPPNLIFRGLVEQLVNNCDMSIKAKTLEFATEY 318
            .::.....::..:.....:.::: ||:|   |..|..|...|. :::.|.||:...| |||..|
plant   241 HVKNIVRNVLESKFDIACDGLKQ-LYDL---GYSPTDIITTLF-RIIKNYDMAEYLK-LEFMKE- 298

  Fly   319 EHRMQSGAKHI 329
                 :|..|:
plant   299 -----TGFAHM 304

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC38	NP_609494.1	rfc	3..345	CDD:234763	91/336 (27%)
RFC2	NP_176504.1	PLN03025	16..333	CDD:178596	91/336 (27%)