Protein Alignment RfC38 and Rfc5

DIOPT Version :10

• Sequence 1: NP_609494.1
• Gene: RfC38 / 34550
• FlyBaseID: FBgn0028700
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_082404.1
• Gene: Rfc5 / 72151
• MGIID: 1919401
• Length: 339
• Species: Mus musculus
• Alignment Length: 363
• Identity: 100/363 - (27%)
• Similarity: 162/363 - (44%)
• Gaps: 82/363 - (22%)

  Fly     4 WVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMY-----GSG 63
            ||:||||:.|:.|..|:|....::....:...|||:.|||.|.||.:.|:...:::|     ||.
Mouse    21 WVEKYRPQTLADLISHQDILSTIQKFISEDRLPHLLLYGPPGTGKTSTILACAKQLYKDKEFGSM 85

  Fly    64 VERLRSETMTFTTPSNRKVEVMTVSSNYHLEVNPSDAGMYDRTVVIDLIK----QVAQTHQIEIS 124
            |                            ||:|.||    ||.  ||:::    ..|.|..|...
Mouse    86 V----------------------------LELNASD----DRG--IDIVRGPILSFASTRTIFKK 116

  Fly   125 GQREFKVIVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNE 189
            |   ||::::.|.|.:|:|||:||||.:||:....|..:..|..|:||||::|||...|......
Mouse   117 G---FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTP 178

  Fly   190 TEIVSILQNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPFT-----------AN 243
            ..:|..|::..:.|.:.:..:..|.:|..|..::||||.:|::..:|....|           ..
Mouse   179 ELMVPRLEHVVQEENVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLK 243

  Fly   244 QEIPD-LDW---QVFLRETASQIISEQTPAKLEKIRE-RLYELLTQGVPPNLIFRGLVEQLVNNC 303
            .:|.: |||   |.|  .||.:.|.|     |:.::. .|:::||:           |...|:..
Mouse   244 TDIANILDWMLNQDF--TTAYKNIME-----LKTLKGLALHDILTE-----------VHLFVHRV 290

  Fly   304 DM--SIKAKTLEFATEYEHRMQSGAKHIFHLEAFVAQF 339
            |.  |::...|....:.|:|:..|......|.:.:|.|
Mouse   291 DFPSSVRIHLLTKMADIEYRLSVGTSEKIQLSSLIAAF 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC38	NP_609494.1	rfc	3..345	CDD:234763	100/363 (28%)
Rfc5	NP_082404.1	rfc	17..328	CDD:234763	99/361 (27%)