Protein Alignment RfC38 and RFC3

DIOPT Version :9

• Sequence 1: NP_001285833.1
• Gene: RfC38 / 34550
• FlyBaseID: FBgn0028700
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_002906.1
• Gene: RFC3 / 5983
• HGNCID: 9971
• Length: 356
• Species: Homo sapiens
• Alignment Length: 349
• Identity: 210/349 - (60%)
• Similarity: 281/349 - (80%)
• Gaps: 0/349 - (0%)

  Fly     1 MALWVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMYGSGVE 65
            |:||||||||..|.:||:||:||..||||.:..|||||:.||||||||||||||:|||:||.|||
Human     1 MSLWVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGVE 65

  Fly    66 RLRSETMTFTTPSNRKVEVMTVSSNYHLEVNPSDAGMYDRTVVIDLIKQVAQTHQIEISGQREFK 130
            :||.|..|.||||.:|:|:.|::|||||||||||||..||.|:.:::|.|||:.|:|.:.||:||
Human    66 KLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRDFK 130

  Fly   131 VIVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETEIVSI 195
            |::::|.|:||||||||||||||||::|||:|:..||||::||.||||||.:||.||:..:|..:
Human   131 VVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSIEDICHV 195

  Fly   196 LQNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPFTANQEIPDLDWQVFLRETAS 260
            |...||:|||.||.:||.|:.:||.||||:||||.||.:|.:.||||:||||:.||:|:|||||:
Human   196 LSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDWEVYLRETAN 260

  Fly   261 QIISEQTPAKLEKIRERLYELLTQGVPPNLIFRGLVEQLVNNCDMSIKAKTLEFATEYEHRMQSG 325
            .|:|:|||.:|.::|.|||||||..:||.:|.:||:.:|::|||..:|.:..:.|..||||:|.|
Human   261 AIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKGEVAQMAAYYEHRLQLG 325

  Fly   326 AKHIFHLEAFVAQFMNIYKKFLSE 349
            :|.|:|||||||:||.:||||:.:
Human   326 SKAIYHLEAFVAKFMALYKKFMED 349

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC38	NP_001285833.1	rfc	3..345	CDD:234763	206/341 (60%)
RFC3	NP_002906.1	PRK12402	3..339	CDD:237090	203/335 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C165147311
Domainoid	1	1.000	234	1.000	Domainoid score	I2397
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H2188
Inparanoid	1	1.050	452	1.000	Inparanoid score	I1607
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53642
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	1	1.000	-	-		FOG0004648
OrthoInspector	1	1.000	-	-		oto89110
orthoMCL	1	0.900	-	-		OOG6_102480
Panther	1	1.100	-	-	LDO	PTHR11669
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1091
SonicParanoid	1	1.000	-	-		X3265
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
User_Submission	0	0.000	Not matched by this tool.
	16	15.800