Protein Alignment RfC38 and Rad17

DIOPT Version :9

• Sequence 1: NP_001285833.1
• Gene: RfC38 / 34550
• FlyBaseID: FBgn0028700
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_001019949.1
• Gene: Rad17 / 310034
• RGDID: 1309515
• Length: 686
• Species: Rattus norvegicus
• Alignment Length: 394
• Identity: 80/394 - (20%)
• Similarity: 151/394 - (38%)
• Gaps: 90/394 - (22%)

  Fly     4 WVDKYRPRELSKLDFHKDQAENLRNLCKQSDF----PH----LMFYGPSGAGKKTRIMCLLREMY 60
            |||||:|....:|..||.:.|.:....|....    .|    |:..||.|.||.|.|..|.:|:
  Rat    90 WVDKYKPETQHELAVHKKKIEEVETWLKTQVLEVKPKHGGSILLITGPPGCGKTTTIKILSKEL- 153

  Fly    61 GSGVERLRSETMTFTTPSNRKVEVMTVSSNYHLEVNPSDAGMYDRTVVIDLIKQVAQTHQIEISG 125
            |..|:...:..:......:.| |:....||:.:....|...:::     |.:.:..:.:::::.|
  Rat   154 GIQVQEWVNPILQDFQKDDYK-ELFNSESNFSVIPYQSQIAVFN-----DFLLRATKYNKLQMLG 212

  Fly   126 Q---REFKVIVISE-GDELTKDAQHALRRTMEKYV--ATCRII------ISVNSTSRII------ 172
            .   .:.|:|::.: .::..:|| :||...:.|||  ..|.::      :|.:|..|::
  Rat   213 DALTTDKKIILVEDLPNQFYRDA-NALHEILRKYVHIGRCPLVFIVSDSVSGDSNHRLLFPKNIQ 276

  Fly   173 --------------PAIRSRCL-----------GIRVAAPNETEIVSILQNTCKRE--GLALPVE 210
                          |.|..:.|           |.::..||:..:..:.|. |..:  .....::
  Rat   277 EECSVSNISFNPVAPTIMMKFLNRIVTIEASKNGEKITVPNKASLELLCQG-CSGDIRSAINSLQ 340

  Fly   211 LAKRVVDKSERNLRRALLMLEAAKVAKA-------PFTANQEIPDL---DWQVFL---------- 255
            .:....:.|..:.::.:.:...|.::||       ....||||..:   |..:||
  Rat   341 FSSSKGENSSWSKKKKMSLKSDASISKAKQKRKHNSTLENQEIQAIGGKDVSLFLFRALGKILYC 405

  Fly   256 -RETASQIISEQTPAKL-EKIRERLY----ELLTQGVPPNLIFRGLVEQLVNNCDMSIKAKTLEF 314
             |...:::.|.:.||.| |..|:.|.    |::.....|...|...:.|  |..|.......|..
  Rat   406 KRAPLTELASPRLPAHLSEHDRDTLLVQPEEIVEMSHMPGEFFNLYLHQ--NYIDFFTDVDDLVR 468

  Fly   315 ATEY 318
            |:|:
  Rat   469 ASEF 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC38	NP_001285833.1	rfc	3..345	CDD:234763	80/394 (20%)
Rad17	NP_001019949.1	rad24	13..651	CDD:129690	80/394 (20%)
		AAA_18	133..>253	CDD:289979	28/127 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900