Protein Alignment RfC38 and F44B9.8

DIOPT Version :9

• Sequence 1: NP_001285833.1
• Gene: RfC38 / 34550
• FlyBaseID: FBgn0028700
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_498750.2
• Gene: F44B9.8 / 176131
• WormBaseID: WBGene00018409
• Length: 368
• Species: Caenorhabditis elegans
• Alignment Length: 395
• Identity: 101/395 - (25%)
• Similarity: 163/395 - (41%)
• Gaps: 104/395 - (26%)

  Fly     4 WVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMYGSGVERLR 68
            ||:||||.:|.:|..|:...:.|....:....|||:||||.|.||.|.::...|:||
 Worm    31 WVEKYRPSKLDELVAHEQIVKTLTKFIENRTLPHLLFYGPPGTGKTTTVLAAARQMY-------- 87

  Fly    69 SETMTFTTPSNRKVEVMTVSSNYHLEVNPSDAGMYDRTVVIDLIKQVAQTHQIEI------SGQR 127
                     |..|:..|.      ||:|.||....|  ||.:.|...|||..::.      :|..
 Worm    88 ---------SPTKMASMV------LELNASDERGID--VVRNTIVNFAQTKGLQAFSTSSNTGTV 135

  Fly   128 EFKVIVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETEI 192
            .||::::.|.|.:|||||:||||.:|||....|..|..|..:.|:|||:|||...|.|..::..|
 Worm   136 PFKLVILDEADAMTKDAQNALRRVIEKYTDNVRFCIICNYLASIVPAIQSRCTRFRFAPLDQKLI 200

  Fly   193 VSILQNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPFTANQEIPDLDWQVFLRE 257
            |..|:...:.|.|.:..:....::..|:.::|..:..|::..::....:.|
 Worm   201 VPRLEYIVETEQLKMTPDGKDALLIVSKGDMRTVINTLQSTAMSFDTVSEN-------------- 251

  Fly   258 TASQIISEQTPAKLEKIRERLYELLTQGVPPNLIFRGLVEQLVNN----CDMSIKAKTLE--FAT 316
            |..|.|.:.||.:::::                     |:.|:|:    |..:|:.|..|  :|.
 Worm   252 TVYQCIGQPTPKEMKEV---------------------VKTLLNDPSKKCMNTIQTKLFENGYAL 295

  Fly   317 -----------------------------EYEHRMQSGAKHIFHLEAFVAQFMNIYK---KFLSE 349
                                         |.|..:.:|..:...|.|.||.|....:   |.:..
 Worm   296 QDVITHLHDFVFTLDIPDEAMSAIITGLGEVEENLSTGCSNETQLAAVVAAFFEAKRLCVKEMKN 360

  Fly   350 LDMTD 354
            |::.|
 Worm   361 LEIED 365

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC38	NP_001285833.1	rfc	3..345	CDD:234763	98/384 (26%)
F44B9.8	NP_498750.2	rfc	27..340	CDD:234763	93/368 (25%)
		AAA	44..194	CDD:99707	59/174 (34%)
		Rep_fac_C	278..340	CDD:285713	8/61 (13%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0470
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820