Protein Alignment RfC38 and rfc-4

DIOPT Version :10

• Sequence 1: NP_609494.1
• Gene: RfC38 / 34550
• FlyBaseID: FBgn0028700
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_498521.1
• Gene: rfc-4 / 175976
• WormBaseID: WBGene00004340
• Length: 334
• Species: Caenorhabditis elegans
• Alignment Length: 307
• Identity: 82/307 - (26%)
• Similarity: 141/307 - (45%)
• Gaps: 56/307 - (18%)

  Fly     4 WVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMYGSGVERLR 68
            |.:||||:.|..:.:..:....|:...:..|.|||:||||.|.||.:..:...|:::
 Worm    17 WTEKYRPKTLDDIAYQDEVVTMLKGALQGRDLPHLLFYGPPGTGKTSAALAFCRQLF-------- 73

  Fly    69 SETMTFTTPSNRKVEVMTVSSNYHLEVNPSDAGMYDRTVVIDLIKQVAQTHQIEISG--QRE--- 128
                    |.|       :..:..|::|.||    :|.:.:  ::|..|:......|  .||
 Worm    74 --------PKN-------IFHDRVLDLNASD----ERGIAV--VRQKIQSFSKSSLGHSHREDVL 117

  Fly   129 -FKVIVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRV-AAPNETE 191
             .|:|::.|.|.:|::||.|:||.:|.:..|.|.|:..|..||:||.:.|||...|. :.|.|.:
 Worm   118 KLKIIILDEVDAMTREAQAAMRRVIEDFSKTTRFILICNYVSRLIPPVVSRCAKFRFKSLPAEIQ 182

  Fly   192 IVSILQNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPFTANQEIPDLDWQVFLR 256
             |..|:..|..||..:..:..|:|::.||.:||||:..|::.    ||...:.:  |.....:||
 Worm   183 -VQRLRTICDAEGTPMSDDELKQVMEYSEGDLRRAVCTLQSL----APILKSGD--DNARNCYLR 240

  Fly   257 ETASQIISEQTPAKLEKIRERLYELLTQGVPPNLIFRGLVEQLVNNC 303
            .::..::          |......:||..||..:   .|.:.:..:|
 Worm   241 GSSDSLL----------ISNVCKSILTADVPQII---ALTKDITKSC 274

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC38	NP_609494.1	rfc	3..345	CDD:234763	82/307 (27%)
rfc-4	NP_498521.1	rfc	17..>234	CDD:234763	73/252 (29%)