Protein Alignment RfC38 and RfC4

DIOPT Version :10

• Sequence 1: NP_609494.1
• Gene: RfC38 / 34550
• FlyBaseID: FBgn0028700
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: XP_308395.5
• Gene: RfC4 / 1269746
• VectorBaseID: AGAMI1_000370
• Length: 341
• Species: Anopheles gambiae
• Alignment Length: 348
• Identity: 89/348 - (25%)
• Similarity: 161/348 - (46%)
• Gaps: 55/348 - (15%)

  Fly     4 WVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMYGSGVERLR 68
            |::||||:...::..:::....|.....|.:.|:::..||.|.||.|.|:||.|.:.|
Mosquito    27 WIEKYRPQRFEEIVGNEETVARLGIFASQGNAPNIIIAGPPGVGKTTTILCLARILLG------- 84

  Fly    69 SETMTFTTPSNRKVEVMTVSSNYHLEVNPSDAGMYDRTVVIDLIKQVAQTHQIEISGQREFKVIV 133
                    |:.|:..         ||:|.|:....|  ||...||..|| .::.:...|. |:::
Mosquito    85 --------PNFREAV---------LELNASNERGID--VVRSKIKMFAQ-QKVTLPRGRH-KIVI 128

  Fly   134 ISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETEIVSILQN 198
            :.|.|.:|:.||.|||||||.|..|.|..::.|::.:||..|:|||..:|.:..::.::::.:..
Mosquito   129 LDEADSMTEGAQQALRRTMEIYSNTTRFALACNTSEKIIEPIQSRCAMLRFSKLSDAQVLAKVVE 193

  Fly   199 TCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPFTANQ----------EIPDLDWQV 253
            .|:.|.|:...:..:.:|..::.::|:||..|::        |||.          ::.|....:
Mosquito   194 ICQHENLSYDEDGLEAIVFTAQGDMRQALNNLQS--------TANGFGHISGANVFKVCDEPHPL 250

  Fly   254 FLRETASQIISEQTPAKLEKIRERLYELLTQGVPPNLIFRGLVEQLVNNCDMSIKAKTLEFATEY 318
            .:::.....:.... .|..||..:|::|   |.....|. |.|.::....||:.|.| |.|..|.
Mosquito   251 LVQDMLQHCVKGDI-HKAYKIMSKLWKL---GYAAEDII-GNVFRVCRRMDMNEKLK-LYFIREI 309

  Fly   319 -EHRMQ--SGAKHIFHLEAFVAQ 338
             |..|:  .|...:..:...:|:
Mosquito   310 GETHMKIVDGLNSLLQMSGLLAR 332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC38	NP_609494.1	rfc	3..345	CDD:234763	89/348 (26%)
RfC4	XP_308395.5	None