Sequence 1: | NP_001285833.1 | Gene: | RfC38 / 34550 | FlyBaseID: | FBgn0028700 | Length: | 356 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_446238.1 | Gene: | Rfc2 / 116468 | RGDID: | 621198 | Length: | 349 | Species: | Rattus norvegicus |
Alignment Length: | 352 | Identity: | 89/352 - (25%) |
---|---|---|---|
Similarity: | 157/352 - (44%) | Gaps: | 63/352 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 WVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMYGSGVERLR 68
Fly 69 SETMTFTTPSNRKVEVMTVSSNYHLEVNPS-DAGMYDRTVVIDLIKQVAQTHQIEISGQREFKVI 132
Fly 133 VISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETEIVSILQ 197
Fly 198 NTCKREGLALPVELAKRVVDKSERNLRRALLMLEAA-------------KVAKAPFTANQEIPDL 249
Fly 250 DWQVFLRETASQIISEQTPAKLEKIRERLYELLTQGVPPNLIFRGLVEQLVNNCDMSIKAKTLEF 314
Fly 315 ATE--YEH-RMQSGAKHIFHLEAFVAQ 338 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RfC38 | NP_001285833.1 | rfc | 3..345 | CDD:234763 | 89/352 (25%) |
Rfc2 | NP_446238.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..27 | ||
PLN03025 | 31..343 | CDD:178596 | 89/352 (25%) | ||
AAA | 46..180 | CDD:99707 | 49/162 (30%) | ||
AAA_assoc_2 | 203..>231 | CDD:292811 | 4/27 (15%) | ||
Rep_fac_C | 269..337 | CDD:285713 | 14/69 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0470 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1071197at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |