Protein Alignment RfC38 and Rfc2

DIOPT Version :10

• Sequence 1: NP_609494.1
• Gene: RfC38 / 34550
• FlyBaseID: FBgn0028700
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_446238.1
• Gene: Rfc2 / 116468
• RGDID: 621198
• Length: 349
• Species: Rattus norvegicus
• Alignment Length: 352
• Identity: 89/352 - (25%)
• Similarity: 157/352 - (44%)
• Gaps: 63/352 - (17%)

  Fly     4 WVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMYGSGVERLR 68
            ||:||||.:|:::..::|....|....::.:.|:::..||.|.||.|.|:||.|.:.|..::
  Rat    33 WVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALK--- 94

  Fly    69 SETMTFTTPSNRKVEVMTVSSNYHLEVNPS-DAGMYDRTVVIDLIKQVAQTHQIEISGQREFKVI 132
                                 :..||:|.| |.|:   .||.:.||..||.......|:.  |:|
  Rat    95 ---------------------DAVLELNASNDRGI---DVVRNKIKMFAQQKVTLPKGRH--KII 133

  Fly   133 VISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETEIVSILQ 197
            ::.|.|.:|..||.|||||||.|..|.|..::.|::.:||..|:|||..:|.....:.:::|.|.
  Rat   134 ILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQVLSRLM 198

  Fly   198 NTCKREGLALPVELAKRVVDKSERNLRRALLMLEAA-------------KVAKAPFTANQEIPDL 249
            |..::|.:....:..:.::..::.::|:||..|::.             ||...|.      |.|
  Rat   199 NVIEKEKVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGYINSENVFKVCDEPH------PLL 257

  Fly   250 DWQVFLRETASQIISEQTPAKLEKIRERLYELLTQGVPPNLIFRGLVEQLVNNCDMSIKAKTLEF 314
                     ..::|.....|.:::..:.|..|...|..|..:. |.:.::.....|:...| |||
  Rat   258 ---------VKEMIQHCVDANIDEAYKILAHLWHLGYSPEDVI-GNIFRVCKTFPMAEYLK-LEF 311

  Fly   315 ATE--YEH-RMQSGAKHIFHLEAFVAQ 338
            ..|  |.| ::..|...:..:...:|:
  Rat   312 IKEIGYTHMKVAEGVNSLLQMAGLLAR 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC38	NP_609494.1	rfc	3..345	CDD:234763	89/352 (25%)
Rfc2	NP_446238.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..27
		PLN03025	31..343	CDD:178596	89/352 (25%)