Protein Alignment RfC38 and rfc3

DIOPT Version :10

• Sequence 1: NP_609494.1
• Gene: RfC38 / 34550
• FlyBaseID: FBgn0028700
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: XP_002934079.1
• Gene: rfc3 / 100493161
• XenbaseID: XB-GENE-984444
• Length: 356
• Species: Xenopus tropicalis
• Alignment Length: 349
• Identity: 207/349 - (59%)
• Similarity: 283/349 - (81%)
• Gaps: 0/349 - (0%)

  Fly     1 MALWVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMYGSGVE 65
            |:||||||||..|||||:||:||..||||.:..|||||:.:|||||||||||||||||:||:|||
 Frog     1 MSLWVDKYRPSSLSKLDYHKEQAVQLRNLVQCGDFPHLLVFGPSGAGKKTRIMCLLRELYGAGVE 65

  Fly    66 RLRSETMTFTTPSNRKVEVMTVSSNYHLEVNPSDAGMYDRTVVIDLIKQVAQTHQIEISGQREFK 130
            :||.|..|.||||.:|:|:.|::|||||||||||||..||.|:.:|:|.|||:.|:|.|.||:||
 Frog    66 KLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQELLKTVAQSQQLETSTQRDFK 130

  Fly   131 VIVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETEIVSI 195
            |::::|.|:||||||||||||||||::|||:|:..||||::|..||||||.:|:.||:..||.::
 Frog   131 VVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIAPIRSRCLAVRICAPSVDEICTV 195

  Fly   196 LQNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPFTANQEIPDLDWQVFLRETAS 260
            |.:.||:|||.||.|||:::.:||.||||:||||.||.:|.:.||:|:|::|:.||:|:::|||:
 Frog   196 LFSVCKKEGLILPQELARKIAEKSGRNLRKALLMCEACRVQQYPFSADQDLPETDWEVYVKETAN 260

  Fly   261 QIISEQTPAKLEKIRERLYELLTQGVPPNLIFRGLVEQLVNNCDMSIKAKTLEFATEYEHRMQSG 325
            .|:|:|||.:|.::|.|||||||..:||.:|.:.|:.:|:||||..:|....:.|..||||:|.|
 Frog   261 AIVSQQTPQRLLEVRGRLYELLTHCIPPEIIIKCLLSELLNNCDGQLKCDVAQMAAYYEHRLQLG 325

  Fly   326 AKHIFHLEAFVAQFMNIYKKFLSE 349
            :|.|:|||||||:||.:||:|:.:
 Frog   326 SKAIYHLEAFVAKFMALYKRFMED 349

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC38	NP_609494.1	rfc	3..345	CDD:234763	204/341 (60%)
rfc3	XP_002934079.1	PRK12402	3..339	CDD:237090	201/335 (60%)