Protein Alignment RfC38 and rfc3

DIOPT Version :9

• Sequence 1: NP_001285833.1
• Gene: RfC38 / 34550
• FlyBaseID: FBgn0028700
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: XP_002934079.1
• Gene: rfc3 / 100493161
• XenbaseID: XB-GENE-984444
• Length: 356
• Species: Xenopus tropicalis
• Alignment Length: 349
• Identity: 207/349 - (59%)
• Similarity: 283/349 - (81%)
• Gaps: 0/349 - (0%)

  Fly     1 MALWVDKYRPRELSKLDFHKDQAENLRNLCKQSDFPHLMFYGPSGAGKKTRIMCLLREMYGSGVE 65
            |:||||||||..|||||:||:||..||||.:..|||||:.:|||||||||||||||||:||:|||
 Frog     1 MSLWVDKYRPSSLSKLDYHKEQAVQLRNLVQCGDFPHLLVFGPSGAGKKTRIMCLLRELYGAGVE 65

  Fly    66 RLRSETMTFTTPSNRKVEVMTVSSNYHLEVNPSDAGMYDRTVVIDLIKQVAQTHQIEISGQREFK 130
            :||.|..|.||||.:|:|:.|::|||||||||||||..||.|:.:|:|.|||:.|:|.|.||:||
 Frog    66 KLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQELLKTVAQSQQLETSTQRDFK 130

  Fly   131 VIVISEGDELTKDAQHALRRTMEKYVATCRIIISVNSTSRIIPAIRSRCLGIRVAAPNETEIVSI 195
            |::::|.|:||||||||||||||||::|||:|:..||||::|..||||||.:|:.||:..||.::
 Frog   131 VVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIAPIRSRCLAVRICAPSVDEICTV 195

  Fly   196 LQNTCKREGLALPVELAKRVVDKSERNLRRALLMLEAAKVAKAPFTANQEIPDLDWQVFLRETAS 260
            |.:.||:|||.||.|||:::.:||.||||:||||.||.:|.:.||:|:|::|:.||:|:::|||:
 Frog   196 LFSVCKKEGLILPQELARKIAEKSGRNLRKALLMCEACRVQQYPFSADQDLPETDWEVYVKETAN 260

  Fly   261 QIISEQTPAKLEKIRERLYELLTQGVPPNLIFRGLVEQLVNNCDMSIKAKTLEFATEYEHRMQSG 325
            .|:|:|||.:|.::|.|||||||..:||.:|.:.|:.:|:||||..:|....:.|..||||:|.|
 Frog   261 AIVSQQTPQRLLEVRGRLYELLTHCIPPEIIIKCLLSELLNNCDGQLKCDVAQMAAYYEHRLQLG 325

  Fly   326 AKHIFHLEAFVAQFMNIYKKFLSE 349
            :|.|:|||||||:||.:||:|:.:
 Frog   326 SKAIYHLEAFVAKFMALYKRFMED 349

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RfC38	NP_001285833.1	rfc	3..345	CDD:234763	204/341 (60%)
rfc3	XP_002934079.1	PRK12402	3..339	CDD:237090	201/335 (60%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	232	1.000	Domainoid score	I2381
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H2188
Inparanoid	1	1.050	448	1.000	Inparanoid score	I1588
OMA	1	1.010	-	-		QHG53642
OrthoDB	1	1.010	-	-		D1071197at2759
OrthoFinder	1	1.000	-	-		FOG0004648
OrthoInspector	1	1.000	-	-		oto102965
Panther	1	1.100	-	-	LDO	PTHR11669
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1091
SonicParanoid	1	1.000	-	-		X3265
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	12	12.110