DRSC/TRiP Functional Genomics Resources

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Protein Alignment Csl4 and AT5G38890

DIOPT Version :10

Sequence 1:NP_609492.1 Gene:Csl4 / 34548 FlyBaseID:FBgn0032346 Length:204 Species:Drosophila melanogaster
Sequence 2:NP_568559.2 Gene:AT5G38890 / 833880 AraportID:AT5G38890 Length:191 Species:Arabidopsis thaliana


Alignment Length:194 Identity:75/194 - (38%)
Similarity:112/194 - (57%) Gaps:14/194 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TVVCLPGERLCRTEDSIVLGIGTYEQNGYIYASKSGIVNI----EDSGDKCQVVSV--HKPGFHL 66
            |.:..||:.:.:..: ...|.|.|..:..||||.:|...|    .:|.|:..:|.|  ||.  |.
plant     3 TGLVTPGDVIGKATE-FKAGKGAYVNDATIYASLTGTCRIVSPLPESIDQRAIVEVTGHKA--HG 64

  Fly    67 TIPATGDVVTARVLVTTPKFAKCAIFCVRNVLLESSYRGLLRKEDVRETEKDRVDIYKSFRPGDV 131
            .||.||.||.|||.....|.|...|.||.:..:..::.|::|::|||.||.|:||:::||..||:
plant    65 PIPETGSVVIARVTKVMTKMAAVDILCVGSKAVRENFAGVIRQQDVRATEIDKVDMHQSFHAGDI 129

  Fly   132 ILARVINQLE-QSFLLTTAENELGVVIAYASDYRKTRVPMVPVGWSEMQCPQTTIKEPRKVAKV 194
            :.|.|::..: :::.|:||:||||||.|.::    ....|||:.|:|||||.:...|.||||||
plant   130 VRAMVLSLGDARAYYLSTAKNELGVVSAESA----AGETMVPISWTEMQCPLSGQTEQRKVAKV 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Csl4NP_609492.1 ECR1_N 10..47 CDD:464162 10/36 (28%)
S1_CSL4 66..156 CDD:240217 37/90 (41%)
AT5G38890NP_568559.2 Csl4 1..187 CDD:440713 71/190 (37%)
S1_CSL4 65..155 CDD:240217 37/89 (42%)

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