back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG14921 and tmtc2a

DIOPT Version :9

Sequence 1:	NP_609491.1	Gene:	CG14921 / 34547	FlyBaseID:	FBgn0032345	Length:	240	Species:	Drosophila melanogaster
Sequence 2:	NP_001124075.1	Gene:	tmtc2a / 564667	ZFINID:	ZDB-GENE-041210-299	Length:	844	Species:	Danio rerio

Alignment Length:	136	Identity:	26/136 - (19%)
Similarity:	48/136 - (35%)	Gaps:	61/136 - (44%)

- Green bases have known domain annotations that are detailed below.

  Fly    80 MFQKLDKEALMQKRLEI-----------ADLIVERNKKRD-----EKALERYDNK---------- 118
            |.||.:.|....|.:|:           ...::|.::..:     :||.| .||:
Zfish   698 MGQKSEAERYFLKAIELDPARGNCYMHYGQFLLEESRLAEAAAMAQKAAE-LDNEEFDVVFSAAH 761

  Fly   119 --RRAEIQKEIQ----RETDMRE-----------------RVKQFQENSVREALVVDVRKEAKAT 160
              |:|.:.:|.:    :..|:|.                 ::|:.:.|.:| ||.:
Zfish   762 MLRQASLNEEAETYYGKAADLRPDHPAALMNLGAILHLNGKLKEAESNYLR-ALQL--------- 816

  Fly   161 PKPDTL 166
             |||.|
Zfish   817 -KPDDL 821

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.