DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14921 and Tmtc3

DIOPT Version :9

Sequence 1:NP_609491.1 Gene:CG14921 / 34547 FlyBaseID:FBgn0032345 Length:240 Species:Drosophila melanogaster
Sequence 2:XP_017450330.2 Gene:Tmtc3 / 314785 RGDID:1306351 Length:1022 Species:Rattus norvegicus


Alignment Length:269 Identity:56/269 - (20%)
Similarity:101/269 - (37%) Gaps:71/269 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LKFNNPPIFFERHL-AQEIDEMASFCRIFKNEARIVLVKKEKGLWPEMFQKLDKEALMQKRLEIA 97
            ||.|.|....|.:| |.|:|.  :...::.|.|.:.:..||.   .|..:..::...:..|.::|
  Rat   681 LKMNKPLKAKEAYLKALELDR--NNADLWYNLAIVYIELKEP---DEALKNFNRALELNSRHKLA 740

  Fly    98 ----DLIVERN---KKRDE--KALERYDNKRRAEI-------------QKEIQRETDMRERVK-- 138
                .::::.:   |.|.|  |.|..|.|:...:.             :|:.:.||.|:..:|  
  Rat   741 LFNSAILMQESGEVKLRPEARKRLLNYINEEPQDANGYFNLGMLAMDDKKDSEAETWMKRAIKLQ 805

  Fly   139 -QFQENSVREALVV-DVRKEAKATP-KPDTLQYPPSS------------------GGASRLATPL 182
             .|:......||:. ...||.||.| ..:.|:|.|..                  .||.:....:
  Rat   806 PDFRSALFNLALLYSQTAKELKALPILEELLRYYPDHTKGLILKGDILMNQKKDIAGAKKCFEKI 870

  Fly   183 MRPPMSSVRGSGRINVNFTTQHKRVTPKR---ESQA-AMEKAY------------AAAGGPNANV 231
            :....|:|:|...:.|.:..:...:..:|   |:.| |..:.|            |::|    .|
  Rat   871 LEMDPSNVQGKHNLCVVYFEEKDLLKAERCLVETLALAPHEEYIQRHLSIVRDKIASSG----IV 931

  Fly   232 QSPMESVDE 240
            ..|:..||:
  Rat   932 DQPLSPVDK 940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14921NP_609491.1 p23_DYX1C1_like 4..81 CDD:107226 14/47 (30%)
Tmtc3XP_017450330.2 DUF1736 366..438 CDD:400627
PEP_TPR_lipo <542..909 CDD:274350 48/232 (21%)
TPR repeat 553..581 CDD:276809
TPR repeat 586..630 CDD:276809
TPR repeat 637..664 CDD:276809
TPR repeat 669..699 CDD:276809 7/17 (41%)
TPR repeat 704..732 CDD:276809 5/30 (17%)
TPR repeat 775..803 CDD:276809 4/27 (15%)
TPR repeat 808..838 CDD:276809 9/29 (31%)
TPR repeat 843..872 CDD:276809 2/28 (7%)
TPR repeat 878..901 CDD:276809 4/22 (18%)
ParB_N_Srx 901..>943 CDD:421688 10/44 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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