DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14921 and Lonrf3

DIOPT Version :9

Sequence 1:NP_609491.1 Gene:CG14921 / 34547 FlyBaseID:FBgn0032345 Length:240 Species:Drosophila melanogaster
Sequence 2:XP_006257509.1 Gene:Lonrf3 / 298322 RGDID:1565451 Length:809 Species:Rattus norvegicus


Alignment Length:93 Identity:28/93 - (30%)
Similarity:37/93 - (39%) Gaps:31/93 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 ERNKKRDE-----------KALERYDNKRRAEIQKEIQRETDMRERV-KQFQENSVREALVVDVR 154
            :|.|.::|           |.||    |:|...|.|.|.:|::..:| ||            |:.
  Rat   446 DRAKSQEEEEQDAASVRTGKCLE----KKRNRCQIETQEDTELPNKVSKQ------------DLP 494

  Fly   155 KEAKATPKPDTLQYPPSSGGASRLATPL 182
            .|..|  ||| |..|..|..||.|...|
  Rat   495 AEQGA--KPD-LSIPLGSFDASDLECSL 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14921NP_609491.1 p23_DYX1C1_like 4..81 CDD:107226
Lonrf3XP_006257509.1 RING 163..200 CDD:302633
TPR_11 247..313 CDD:290150
TPR repeat 248..276 CDD:276809
TPR repeat 281..311 CDD:276809
TPR repeat 316..339 CDD:276809
RING 516..555 CDD:238093 1/4 (25%)
LON_substr_bdg 605..806 CDD:280370
LON 616..802 CDD:271862
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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