DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14921 and Tmtc4

DIOPT Version :9

Sequence 1:NP_609491.1 Gene:CG14921 / 34547 FlyBaseID:FBgn0032345 Length:240 Species:Drosophila melanogaster
Sequence 2:XP_006252585.1 Gene:Tmtc4 / 290501 RGDID:1560183 Length:773 Species:Rattus norvegicus


Alignment Length:80 Identity:18/80 - (22%)
Similarity:31/80 - (38%) Gaps:30/80 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 FCRIFKNEAR-------------------IVLVKKEKGL----WPEMFQKLDKEALMQKRLEIAD 98
            :||.||....                   :.::.||:|:    ...:|     :.|:..||:|  
  Rat   219 YCRAFKETGNKEGTHSSTFWVLLSIFLGAVAMLCKEQGVTVLGLNAVF-----DILVIGRLDI-- 276

  Fly    99 LIVERNKKRDEKALE 113
            |:..|...|.:|:||
  Rat   277 LVAVRKVLRKDKSLE 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14921NP_609491.1 p23_DYX1C1_like 4..81 CDD:107226 7/46 (15%)
Tmtc4XP_006252585.1 DUF1736 324..398 CDD:285594
TPR 513..771 CDD:223533
TPR_1 514..547 CDD:278916
TPR repeat 514..542 CDD:276809
TPR_17 536..569 CDD:290167
TPR repeat 547..577 CDD:276809
TPR_1 582..615 CDD:278916
TPR repeat 582..610 CDD:276809
TPR repeat 616..642 CDD:276809
TPR repeat 650..678 CDD:276809
TPR repeat 683..713 CDD:276809
TPR_17 706..739 CDD:290167
TPR repeat 718..746 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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