DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6230 and PMA1

DIOPT Version :9

Sequence 1:NP_609490.1 Gene:CG6230 / 34546 FlyBaseID:FBgn0027582 Length:1225 Species:Drosophila melanogaster
Sequence 2:NP_011507.1 Gene:PMA1 / 852876 SGDID:S000002976 Length:918 Species:Saccharomyces cerevisiae


Alignment Length:907 Identity:202/907 - (22%)
Similarity:328/907 - (36%) Gaps:252/907 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 SRGLETEEDIKRATQTYGNNEM----EMVVPEFHELFIERATAPF-FVFQVFSVGLWCMDDYWYY 271
            |.||.::|.:|| .:.||.|:|    |.:|.:|...|:    .|. ||.:..::....:.|:..:
Yeast    85 SYGLTSDEVLKR-RKKYGLNQMADEKESLVVKFVMFFV----GPIQFVMEAAAILAAGLSDWVDF 144

  Fly   272 SLFT-LFMLIA-------FECTIVKQQLRNMSEIRKMGNKPYLIYAFRQNKWRHLGSDELLPGDL 328
            .:.. |.||.|       |:...:..:|:     :.:.|...:|   |..:...:.::|::|||:
Yeast   145 GVICGLLMLNAGVGFVQEFQAGSIVDELK-----KTLANTAVVI---RDGQLVEIPANEVVPGDI 201

  Fly   329 VSITRSQNDNIVPCDLVILRGSCI--VDESMLTGESVPLMKESLESLDNLDVEMDAEGDGKLFVL 391
            :.:   ::..::|.|..|:...|.  :|:|.:||||:.:.|.                       
Yeast   202 LQL---EDGTVIPTDGRIVTEDCFLQIDQSAITGESLAVDKH----------------------- 240

  Fly   392 FGGTKVVQHTAPTKESLRAPDGGCIGYVIRTGFNTSQGK---LLRTILFGANRATE--NNVETFA 451
            :|.......|....|....        |..||.||..|:   |:.....|....||  |.:.   
Yeast   241 YGDQTFSSSTVKRGEGFMV--------VTATGDNTFVGRAAALVNKAAGGQGHFTEVLNGIG--- 294

  Fly   452 FIAFLMVFAVAAASYVWVKGSEDPERNRYKLFLECTLILTSI-IPPDLPIELTLAVNTSLIQLTK 515
              ..|:|..:|....||.....  ..|.....|..||.:|.| :|..||..:|..:......|.|
Yeast   295 --IILLVLVIATLLLVWTACFY--RTNGIVRILRYTLGITIIGVPVGLPAVVTTTMAVGAAYLAK 355

  Fly   516 LFVFCTEPFRIPFAGKVQICCFDKTGTLTTDNLMVE---GIAGLAPNGACVPIEKAEGNTVQVLA 577
            ......:...|.....|:|.|.|||||||.:.|.:.   .:.|::|:..             :|.
Yeast   356 KQAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHEPYTVEGVSPDDL-------------MLT 407

  Fly   578 CCHSLALLDDGLVGDPLEKATLAAVDWTLTKMDSVIPK-RPQFKPLKIIQRYHFSSALKRMSVLA 641
            .|.:.:....||  |.::||.|.::        ...|| :......|:::.:.|....|:::.  
Yeast   408 ACLAASRKKKGL--DAIDKAFLKSL--------KQYPKAKDALTKYKVLEFHPFDPVSKKVTA-- 460

  Fly   642 GHLIPYSNEVKHIGAVKGAPEVIQKMLRE---VPAD----YEKVYLEYARRGARVLALGIKDLGT 699
               :..|.|.:.|..|||||..:.|.:.|   :|.|    ||....|.|.||.|  |||:     
Yeast   461 ---VVESPEGERIVCVKGAPLFVLKTVEEDHPIPEDVHENYENKVAELASRGFR--ALGV----- 515

  Fly   700 LGAQRVREMKREEVECDLTFAGFLIISCPMKPDSKSVIKELIQSSHKVVMITGDSPLTACHVARE 764
                   ..||.|...::  .|.:....|.:.|:...:.|......:|.|:|||:...|....|:
Yeast   516 -------ARKRGEGHWEI--LGVMPCMDPPRDDTAQTVSEARHLGLRVKMLTGDAVGIAKETCRQ 571

  Fly   765 LRFTRKKLIILTPPEEDRKNNWSWVSIDGDQSYELD--------TKPGSKKLSHLLATHDLCITG 821
            |..                         |...|..:        ..|||:     ||  |.....
Yeast   572 LGL-------------------------GTNIYNAERLGLGGGGDMPGSE-----LA--DFVENA 604

  Fly   822 EGLQYLQQNQPQYMRQLLPQITVCARFAPKQKELVITQLKQLGYCTLMCGDGTNDVGALKHANVG 886
            :|.                     |...|:.|..|:..|:..||...|.|||.||..:||.|:.|
Yeast   605 DGF---------------------AEVFPQHKYRVVEILQNRGYLVAMTGDGVNDAPSLKKADTG 648

  Fly   887 VSLLTSAPVKRKRTEEEQQQAAANAAAIA--AQAQANANQQLTTRERALRRRQEH---------- 939
            :::            |....||.:||.|.  |...:.....|.|..:...|...:          
Yeast   649 IAV------------EGATDAARSAADIVFLAPGLSAIIDALKTSRQIFHRMYSYVVYRIALSLH 701

  Fly   940 ----LNQTQARLQNALRDMEEQTMVKL-GD-ASIA-----APFTSK----------SSSIMCVNH 983
                |....|.|.|:| |::....:.: .| |::|     ||::.|          ..||: :..
Yeast   702 LEIFLGLWIAILDNSL-DIDLIVFIAIFADVATLAIAYDNAPYSPKPVKWNLPRLWGMSII-LGI 764

  Fly   984 IIKQGRCTLVTTLQMFKILALNALIQAYCQSVLYIDGIKFSDTQATMQGIFIAACFLFITRA 1045
            ::..|....:||:    .|....:||.:..    ::||.|.....|...:      :|||||
Yeast   765 VLAIGSWITLTTM----FLPKGGIIQNFGA----MNGIMFLQISLTENWL------IFITRA 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6230NP_609490.1 P-ATPase-V 109..1193 CDD:273738 202/907 (22%)
E1-E2_ATPase 310..515 CDD:278548 46/212 (22%)
Cation_ATPase <590..664 CDD:289987 17/74 (23%)
COG4087 <850..901 CDD:226572 16/50 (32%)
PMA1NP_011507.1 P-type_ATPase_H 87..874 CDD:319771 201/905 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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