DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6230 and JYalpha

DIOPT Version :10

Sequence 1:NP_609490.1 Gene:CG6230 / 34546 FlyBaseID:FBgn0027582 Length:1225 Species:Drosophila melanogaster
Sequence 2:NP_001104092.2 Gene:JYalpha / 5740846 FlyBaseID:FBgn0267363 Length:1009 Species:Drosophila melanogaster


Alignment Length:864 Identity:182/864 - (21%)
Similarity:313/864 - (36%) Gaps:276/864 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 LAFLTCR-RVKLPGANVLAKVVPTPNNGNSKIVPIRSSKLEDGSTQYYFVFQKTKY------VWN 189
            |:|:..: |:::.|.|:|....|||.                     :.||.||.:      :|.
  Fly    52 LSFVEAKLRLEINGPNILTPQPPTPK---------------------WIVFLKTMFGGFAILLWA 95

  Fly   190 EDRKTFRAVEFPVNGLLSTYSSSRGLETEEDIKRATQTYGNNEMEMVVPEFHELFIERATAPFFV 254
            .....|      |..|:.       |:|:.:                 |....|::..|.....:
  Fly    96 GSFLCF------VGYLIQ-------LQTQHE-----------------PPDDNLYLGIALTVLVI 130

  Fly   255 FQVFSVGLWCMDDYWYYSLFTLFMLIAFECTIVKQQLRNMSEIRKMGNKPYLIYAFRQNKWRHLG 319
            ..               .|||.|.:  .:.:.:....:|:        .|......|:.:...:.
  Fly   131 VT---------------GLFTYFQV--HKSSSIMDSFKNL--------VPQYATVIREGEINTVT 170

  Fly   320 SDELLPGDLVSITRSQNDNIVPCDLVILRGSCI-VDESMLTGESVPLMKESLESLDNLDVEMDAE 383
            |||::.||:|.:.....   ||.|:.||....: ||.|.|||||.|.::.:..:.:|   .::.:
  Fly   171 SDEIVKGDIVEVKFGDR---VPADIRILEAHGLKVDNSSLTGESEPQVRSTEFTHEN---PLETK 229

  Fly   384 GDGKLFVLFGGTKVVQHTAPTKESLRAPDGGCIGYVIRTGFNTSQGKLLRTILFGANRA------ 442
            .     :.|..|.|:             :|.|.|.||.||.:|..|::       ||.|      
  Fly   230 N-----LAFFSTNVL-------------EGTCRGVVIATGDSTVMGRI-------ANLAAGLDDV 269

  Fly   443 -TENNVETFAFIAFLMVFA-VAAASYVWVK---GSEDPERNRYKLFLECTLILTSIIPPDLPIEL 502
             :..:.|...||.|:.:|| :...|:..:.   |.|         |::..:.|..||..::|..|
  Fly   270 QSPISREIQLFIRFITIFAIILGLSFFAISLTLGYE---------FIDAVVFLIGIIVANVPEGL 325

  Fly   503 TLAVNTSLIQLTKLFV----FCTEPFRIPFAGKVQICCFDKTGTLTT----------DNLMVEGI 553
            .:.|...|....|...    .......:...|.....|.|||||||.          |.::||..
  Fly   326 LVTVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWYDQIIVESD 390

  Fly   554 AGLAPNGACVPIEKAEGNTVQVLACCHSLALLDDGLVGDPLEKATLAAVDWTLTKMDSVIPKRPQ 618
            ...:..|:...||....|.:.:.|...:.|....|                    .|.:    |.
  Fly   391 TTESFRGSHFKIEDKSFNALFMCAALCNSAEFKGG--------------------QDDI----PV 431

  Fly   619 FKPLKIIQRYHFSSALKRM--SVLAG-------HL----IPYSNEVKH--------------IGA 656
            ||  |.:......:||.:.  ::.||       |:    ||:::..|:              |..
  Fly   432 FK--KDVNGNASEAALLKFTETIFAGIGAFRQKHIKLTEIPFNSTEKYQVSVHEFNSSDGYFIVE 494

  Fly   657 VKGAPE---------VIQKMLRE----VPADYEKVYLEYARRGARVLALGIKDLGTLGAQRVREM 708
            :|||||         :||.:..|    :..::|:.|||....|.||  ||..||       :..|
  Fly   495 MKGAPERILDRCSTIIIQGLSVELTPTLKLEFEEAYLEMGGMGERV--LGFADL-------LLPM 550

  Fly   709 KREEVECD------------LTFAGFLIISCPMKPDSKSVIKELIQSSHKVVMITGDSPLTACHV 761
            .:..:..:            |.|.|.:.:..|.:......:.:...:..:|:|:|||.|:||..:
  Fly   551 SKYPISYEFSADPPNFPLENLRFLGLISLIDPPRAAVPDAVAKCRSAGVRVIMVTGDHPITAKAI 615

  Fly   762 ARELRFTRKKLIILTPPEED--RKNNWSWVSIDGDQSYELDTKPG------SKKLSHLLATHDLC 818
            ||.:.      ||.||..||  ::...:.:.||..|:..:....|      :::|..::..|   
  Fly   616 ARSVG------IITTPTAEDIAKQRGVTVLDIDSRQATAIVVHGGELREMKAEELDAVIYYH--- 671

  Fly   819 ITGEGLQYLQQNQPQYMRQLLPQITVCARFAPKQKELVITQLKQLGYCTLMCGDGTNDVGALKHA 883
                       |:           .|.||.:|:||.:::...::.|....:.|||.||..|||.|
  Fly   672 -----------NE-----------IVFARTSPQQKLIIVEACQRRGEIVAVTGDGVNDSPALKRA 714

  Fly   884 NVGVSL-LTSAPVKRKRTE 901
            ::||:: ::.:.|.::..:
  Fly   715 DIGVAMGISGSDVSKQAAD 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6230NP_609490.1 P-type_ATPase_cation 220..1152 CDD:319843 163/769 (21%)
JYalphaNP_001104092.2 P-type_ATPase_Na-K_like 51..1006 CDD:319794 182/864 (21%)

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