DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6230 and SPoCk

DIOPT Version :10

Sequence 1:NP_609490.1 Gene:CG6230 / 34546 FlyBaseID:FBgn0027582 Length:1225 Species:Drosophila melanogaster
Sequence 2:NP_001262220.1 Gene:SPoCk / 40495 FlyBaseID:FBgn0052451 Length:1062 Species:Drosophila melanogaster


Alignment Length:1059 Identity:230/1059 - (21%)
Similarity:404/1059 - (38%) Gaps:263/1059 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 STYSSSR-----------GLETEEDIKRATQTYGNNEMEMVV--PEFHELFIERATAPFFVF--- 255
            ||:|:|.           ||:..|...|| :..|:||:.:|.  |.:.: :||:...|..:.   
  Fly   112 STHSASEVAGRLQVDVRTGLKWTEAKYRA-KIIGHNELLLVAEDPTWKK-YIEQFRNPLILLLLG 174

  Fly   256 -QVFSVGLWCMDDYWYYSLFTLFMLIAFECTIVKQ--QLRNMSEIRKMGNKPYLIYAFRQNKWRH 317
             .:.||.:...||   ....|:.:||......:::  ..:::.|::|:  .|...:..|:.:...
  Fly   175 SALVSVIMKQFDD---AVSITIAILIVVTVAFIQEYRSEKSLEELKKL--VPPECHCLREGRLDT 234

  Fly   318 LGSDELLPGDLVSITRSQNDNIVPCDLVILRG-SCIVDESMLTGESVPLMKESLESLDNLDVEMD 381
            ..:.||:|||:|.:.....   ||.|:.:... ...:|||..|||:.|..|.:...|:|.:|:  
  Fly   235 FLARELVPGDIVHLNVGDR---VPADVRLFEAVDLSIDESSFTGETEPARKITDVLLNNTNVK-- 294

  Fly   382 AEGDGKLFVLFGGTKVVQHTAPTKESLRAPDGGCIGYVIRTGFNTSQGKLLRTILFGANRATENN 446
             :......:.|.||.|           |..:|.  |.|:.||..:..|::.:  :..|..|.:..
  Fly   295 -DHSNMKNIAFMGTLV-----------RCGNGK--GIVVSTGERSEFGEVFK--MMQAEEAPKTP 343

  Fly   447 VE--------TFAFIAFLMVFAVAAASYVWVKGSEDPERNRYKLFLECTLILTSIIPPDLPIELT 503
            ::        ..:|.:||::..:....  |::|....|     :|.....:..:.||..|||.:|
  Fly   344 LQKSMDILGAQLSFYSFLIIGVIMLLG--WLQGKPLSE-----MFNISVSLAVAAIPEGLPIVVT 401

  Fly   504 LAVNTSLIQLTKLFVFCTEPFRIPFAGKVQICCFDKTGTL-----------TTDNLMVEGIAGLA 557
            :.:...::::.|......:...:...|.|.:.|.||||||           |:|..|.: :.|..
  Fly   402 VTLALGVMRMAKRNSIVKKLPTVETLGCVNVICSDKTGTLTKNEMTATIIITSDGYMAD-VTGAG 465

  Fly   558 PNGA-------CVPIEKAEGNTVQVL---ACCHSLALLDDGLVGDPLEKATLAAVDWTLTKMDSV 612
            .|..       |..:|.|:.|...:|   |.|::..:.:..|:|.|.|.|.:|           |
  Fly   466 YNDQGEIHIRHCNNVEMAKTNITNLLEIGAVCNNAYIQNGTLLGQPTEGALVA-----------V 519

  Fly   613 IPKRPQFKPLK---IIQRYHFSSALKRMSVLAGHLIPYSNEVKHIGAVKGAPEVI-------QKM 667
            ..|...:...:   .||.|.|||..|.|:|...|  .|:|..:.|...|||.|.:       |..
  Fly   520 AMKNGMYATAENYVRIQEYPFSSEQKMMAVKCIH--KYNNNKEEIFFAKGALETLLPQCTKYQFG 582

  Fly   668 LREVP------ADYEKVYLEYARRGARVLALGIKDLGTLGAQRVREMKREEVECDLTFAGFLIIS 726
            .:.||      |::.....|..|:|.|||||.          :.|.|:      ||.:.|.:.|:
  Fly   583 TQTVPLTKQNEAEFLAEAYEIGRKGLRVLALA----------KGRSMQ------DLIYCGLVGIT 631

  Fly   727 CPMKPDSKSVIKELIQSSHKVVMITGDSPLTACHV--ARELRFTRKKLIILTPP----------- 778
            .|.:|..:..|:.|:||..:|.|:|||:..||..:  :|.|:......|...|.           
  Fly   632 DPPRPLVRESIEMLMQSGVRVKMVTGDAQETALAIDPSRRLQAVPTHAIPAWPTAGGVPLCSASA 696

  Fly   779 -------EEDRKNNWSWVSIDGDQSYELDTKPGSKKLSHLLATHDLCITGEGLQYLQQNQPQYMR 836
                   |...|.  .:::....|...|.|    ..|..:...|...::|:.:..:.::|   :.
  Fly   697 CCSTNCLENAMKE--IYLTALAQQGLPLVT----ANLIGIDTIHHQTLSGQEMDQMNEHQ---LD 752

  Fly   837 QLLPQITVCARFAPKQKELVITQLKQLGYCTLMCGDGTNDVGALKHANVGVSL-LTSAPVKRKRT 900
            ::...::|..|.:|:.|..::..|::.|....|.|||.||..|||.|::|::: .....|.::..
  Fly   753 KVANNVSVFYRVSPRHKLEIVKSLQRSGNIVGMTGDGVNDGVALKKADIGIAMGKNGTDVCKEAA 817

  Fly   901 E---------------EEQQ------------QAAANAAAIAAQAQAN----ANQQLTTRERALR 934
            :               ||.:            |.:.:.||:|..|.|.    ||.          
  Fly   818 DMILVNDDFHTIIAAIEEGKGIFYNIRNFVRFQLSTSIAALALIALATLMDIANP---------- 872

  Fly   935 RRQEHLNQTQARLQNALRDMEEQTMVKLGDASIAAPFTSKSSSIMCVNHIIKQGRCTLVTTLQMF 999
                 ||..|....|.:.|               .| .::|..:..|:|.:.:.:...|....:.
  Fly   873 -----LNAMQILWINIIMD---------------GP-PAQSLGVEPVDHDVLKQKPRNVKQPMIT 916

  Fly  1000 KILALNALIQAYCQSVLYID--------------GIKFSDTQATMQGIFIAACFLFITRAKPLKT 1050
            |.:.:|.|:.|   |::.:.              |....||..|.      .||:|......|..
  Fly   917 KSVVVNVLLSA---SIIVLGTLWVFQREMADGTLGKTKRDTTMTF------TCFVFFDMFNALSC 972

  Fly  1051 LSKVAPLPNIFNFYTISTILSQFAVHFGTLYYLTSQANILAPPREGKVKLYIDMDAEEKTKYDPN 1115
            .|:.   .::|.....:..:...||.|..:..:..   :..||      |.:....|..|.||  
  Fly   973 RSQT---KSVFTIGLTTNRMFLLAVAFSIIGQMLV---VYFPP------LQMVFQTEALTPYD-- 1023

  Fly  1116 IVSSTVYIICLSLQVATIA 1134
                ..:::.|:..|..::
  Fly  1024 ----IFFLVSLTSSVLVVS 1038

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6230NP_609490.1 P-type_ATPase_cation 220..1152 CDD:319843 223/1035 (22%)
SPoCkNP_001262220.1 P-type_ATPase_SPCA 139..1042 CDD:319779 223/1032 (22%)

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