DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6230 and ATP7

DIOPT Version :9

Sequence 1:NP_609490.1 Gene:CG6230 / 34546 FlyBaseID:FBgn0027582 Length:1225 Species:Drosophila melanogaster
Sequence 2:NP_001259466.1 Gene:ATP7 / 32142 FlyBaseID:FBgn0030343 Length:1254 Species:Drosophila melanogaster


Alignment Length:1125 Identity:204/1125 - (18%)
Similarity:358/1125 - (31%) Gaps:413/1125 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 VLAIAFLHI--LTLLFCYWSVH------------VLAFLTCRRVKLPGANV-----LAKVV---- 152
            :|...||||  :|...|..::.            ::|.|..:......|||     :||.:    
  Fly   206 LLTKCFLHIRGMTCASCVAAIEKHCKKIYGLDSILVALLAAKAEVKFNANVVTAENIAKSITELG 270

  Fly   153 -PT-----PNNGNSKI---------------VPIRSSKLEDGSTQYYFVFQKT---KYVWNE--D 191
             ||     |:||.:::               :.....|:...:|....:..|.   :|:..|  .
  Fly   271 FPTELIDEPDNGEAEVELEIMGMTCASCVNKIESHVLKIRGVTTASVTLLTKRGKFRYITEETGP 335

  Fly   192 RKTFRAVEFPVNGLLSTYSSSRG------LETEEDIKRATQTY---------------------- 228
            |....|:|  ..|..:...:.|.      ||.:|:|::....:                      
  Fly   336 RSICEAIE--ALGFEAKLMTGRDKMAHNYLEHKEEIRKWRNAFLVSLIFGGPCMVAMIYFMLEMS 398

  Fly   229 --GNNEMEMVVP----EFHELFIERATAPFF--------VFQVFSVGLWCMDDY--------WYY 271
              |:..|..:||    |...:|:......||        .::....|...||..        :.|
  Fly   399 DKGHANMCCLVPGLSMENLVMFLLSTPVQFFGGFHFYVQSYRAIKHGTTNMDVLISMVTTISYVY 463

  Fly   272 SLFTLFMLIAFECTIVKQQLRNMSEIRKMGNKPYLIYAFRQNKW-RHLGSD-------------- 321
            |:..:...:..|        :|.|.:......|.|:......:| .|:...              
  Fly   464 SVAVVIAAVLLE--------QNSSPLTFFDTPPMLLIFISLGRWLEHIAKGKTSEALSKLLSLKA 520

  Fly   322 ------------ELLPGDLVSITRSQNDNI--------VPCDLVILRGSCIVDESMLTGESVPLM 366
                        :::...::|:...|..:|        ||.|..:|.|....|||::||||:|:.
  Fly   521 ADALLVEISPDFDIISEKVISVDYVQRGDILKVIPGAKVPVDGKVLYGHSSCDESLITGESMPVA 585

  Fly   367 KESLESLDNLDVEMDAEGDGKLFVLFGGTKVVQHTAPTKESLRAPDGGCIGYVIRTGFNTSQGKL 431
            |.                  |..|:.||: :.|            :|..:.....||.||:..::
  Fly   586 KR------------------KGSVVIGGS-INQ------------NGVLLVEATHTGENTTLAQI 619

  Fly   432 LRTILFGANRATENNVETFA------FIAFLMVF-AVAAASYVWVKGSED---PERNRYKLFLEC 486
            :|  |....:.::..::..|      |:.|::|. ::...:::.:..|..   |....:|:.::.
  Fly   620 VR--LVEEAQTSKAPIQQLADRIAGYFVPFVVVVSSITLIAWIIIGFSNPNLVPVAMEHKMHMDQ 682

  Fly   487 TLILT--------SIIPPDLPIELTLAVNTSLIQLTKL----FVFCTEPFRIPFAGKVQICCFDK 539
            ..|:.        |::....|..|.||..|:::..|..    .|.......:..|.||:...|||
  Fly   683 NTIIVSYAFKCALSVLAIACPCALGLATPTAVMVATGTGAINGVLVKGATALENAHKVKTVVFDK 747

  Fly   540 TGTLTTDNLMVEGIAGLAPNGACVPIEKAEGNTVQVLACCHSLALLDDGLVGDPLEKATLAAVDW 604
            |||:|....|...:....              |.||.:...:|.::  |......|....:|:..
  Fly   748 TGTITHGTPMTSKVTLFV--------------TAQVCSLARALTIV--GAAEQNSEHPIASAIVH 796

  Fly   605 TLTKMDSV--IPKRPQFKPLKIIQRYHFSSA--------------LKRMSVLAGHLIPYSN---- 649
            ....|.:|  .|:...|.     :..||.:.              ..|.:..|..:|.|.|    
  Fly   797 FAKDMLNVGATPQAGSFG-----KSSHFQAVPGCGIRVTVSNYEQTLRQACNADRIINYENLHRT 856

  Fly   650 ------------EVKHI---GAVKGAPEV-IQKMLREVPADYEKVYL------------------ 680
                        .::|:   .:|:.:.|: .|::|.::..:.|:..|                  
  Fly   857 HPQGSVPVDNGASIEHLLPQRSVRKSMELNNQQLLSDLVLEPEEELLTDQKIIDSPEILVLIGNR 921

  Fly   681 EYARRGARVLALGIKDLGTLGAQRVREMKREE------VECDLTFAGFLI----ISCPMKPDSKS 735
            |:..|.|..:.|.|.|.          |..||      |.|.|.  |.|:    :|..:||::..
  Fly   922 EWMERNAIEVPLEISDC----------MTHEERKGHTAVLCALN--GQLVCMFAVSDMVKPEAHL 974

  Fly   736 VIKELIQSSHKVVMITGDSPLTACHVARELRFTRKKLIILTPPEEDRKNNWSWVSIDGDQSYELD 800
            .:..|.:....||::|||:..||..:|||:                                   
  Fly   975 AVYTLKRMGIDVVLLTGDNKNTAASIAREV----------------------------------- 1004

  Fly   801 TKPGSKKLSHLLATHDLCITGEGLQYLQQNQPQYMRQLLPQITVCARFAPKQKELVITQLKQLGY 865
                                  |::                 ||.|...|..|...|.:::..|.
  Fly  1005 ----------------------GIR-----------------TVYAEVLPSHKVAKIQRIQANGI 1030

  Fly   866 CTLMCGDGTNDVGALKHANVGVSLLTSAPVKRKRTEEEQQQAAANAAAIAAQAQANANQQLTT-- 928
            ...|.|||.||..||..|:||:::                .|..:.||.|:......|..|..  
  Fly  1031 RVAMVGDGVNDSPALAQADVGITI----------------AAGTDVAAEASDIVLMRNDLLDVVA 1079

  Fly   929 ---RERALRRRQEHLNQTQARLQNALRDMEEQTMVKLGDASIAAPF-------------TSKSSS 977
               ..|...||..: |...|.:.|.|.       :.|. :.:.||:             .:.|.|
  Fly  1080 CLDLSRCTVRRIRY-NFFFASMYNLLG-------IPLA-SGLFAPYGFTLLPWMASVAMAASSVS 1135

  Fly   978 IMCVNHIIKQGRCTLVTTLQ 997
            ::|.:.::|..|.....||:
  Fly  1136 VVCSSLLLKMYRKPTAKTLR 1155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6230NP_609490.1 P-ATPase-V 109..1193 CDD:273738 204/1125 (18%)
E1-E2_ATPase 310..515 CDD:278548 45/257 (18%)
Cation_ATPase <590..664 CDD:289987 16/109 (15%)
COG4087 <850..901 CDD:226572 15/50 (30%)
ATP7NP_001259466.1 HMA 16..78 CDD:238219
HMA 97..159 CDD:238219
HMA 214..274 CDD:238219 11/59 (19%)
ZntA 285..1131 CDD:225127 178/1020 (17%)
HMA 287..350 CDD:238219 9/64 (14%)
E1-E2_ATPase 489..735 CDD:278548 48/278 (17%)
COG4087 <984..1085 CDD:226572 35/190 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438600
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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