DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6230 and Atp13a4

DIOPT Version :10

Sequence 1:NP_609490.1 Gene:CG6230 / 34546 FlyBaseID:FBgn0027582 Length:1225 Species:Drosophila melanogaster
Sequence 2:NP_001178587.2 Gene:Atp13a4 / 288026 RGDID:1306927 Length:1193 Species:Rattus norvegicus


Alignment Length:1245 Identity:333/1245 - (26%)
Similarity:545/1245 - (43%) Gaps:257/1245 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VLPFVPLYLSAFYLWINVTGGQENDTTNNDVITADNQTTTD--NITTWNDVGFIGVLAIAFLHIL 120
            :||.|..:..|:.:|.|.......:.   |::..   .|||  .|.:|..|.:|.:.|::....|
  Rat    46 MLPLVFYWRPAWRVWANCVPCSLQEA---DIVLL---RTTDEFKIYSWKKVMWISLSALSSTSGL 104

  Fly   121 TLLFCYWSVHVL----AFLTCRRVKLPGANVLAKVVPTPNNGNSKIVPIRSSKLEDGSTQYYFVF 181
            |      ..|.|    .|:..|.::.|...|                             .|...
  Rat   105 T------PDHPLIADEEFIINRAIRKPDLKV-----------------------------RYIKV 134

  Fly   182 QKTKYVWNEDRKTFRAVEFPVNGLLSTYSSSR-------GLETEE-DIKRATQTYGNNEMEMVVP 238
            ||.:||||.....|:    .:..|....||::       ||.:|| :|:|.  ..|.|.:::.:.
  Rat   135 QKIRYVWNNLEGQFQ----KIGSLEDCLSSAKIHQKFGLGLTSEEQEIRRL--ICGPNAIDVEII 193

  Fly   239 EFHELFIERATAPFFVFQVFSVGLWCMDDYWYYSLFTLFM-LIAFECTI--VKQQLRNMSEIRKM 300
            ...:|.::....||::||:|||.||..:||..|:|..:.| :|:...|:  ::||...:..:.:.
  Rat   194 PIWKLLVKEVLNPFYIFQLFSVCLWFSEDYKEYALAIILMSVISIALTVYDLRQQSVKLHHLVES 258

  Fly   301 GNKPYLIYAFRQNKWRHLGSDELLPGDLVSITRSQNDNIVPCDLVILRGSCIVDESMLTGESVPL 365
            .|...:....|:...:.|.|..|:||||:.:|.|:..  :|||.|::.|||:|||.||||||:|:
  Rat   259 HNSITVSVYERKAGAQDLESRLLVPGDLLILTGSRVQ--MPCDAVLIDGSCVVDEGMLTGESIPV 321

  Fly   366 MKESL-ESLDNLDVEMDAEGDGKLFVLFGGTKVVQHTAPTKESLRAPDGGCIGYVIRTGFNTSQG 429
            .|..| ::..:...:|.:|.|.:..:||.||:|:|..|....::||       .|::|||||::|
  Rat   322 TKTPLSQTASSAPWKMQSEADPRRHILFCGTEVIQAKAAGSGTVRA-------VVLQTGFNTAKG 379

  Fly   430 KLLRTILFGANRATENNVETFAFIAFLMVFAVAAASY---VWVKGSEDPERNRYKLFLECTLILT 491
            .|:|:||:......:...:...|:..|:..|.....|   |:|...|.||    ::..:...::|
  Rat   380 DLVRSILYPKPMNFKLYRDAIRFLLCLVGTATIGMIYTLCVYVLSGEPPE----EVVRKALDVIT 440

  Fly   492 SIIPPDLPIELTLAVNTSLIQLTKLFVFCTEPFRIPFAGKVQICCFDKTGTLTTDNLMVEGIAGL 556
            ..:||.||..||..:..:..:|.|..:||..|.||...|::.:.|||||||||...|.:.|:...
  Rat   441 IAVPPALPAALTTGIIYAQRRLKKKGIFCISPQRINVCGQLNLVCFDKTGTLTRGGLDLWGVVPC 505

  Fly   557 APNGACVPIEKAEGNTV------QVLACCHSLALLDDGLVGDPLEKATLAAVDWTLT-------- 607
            ..||.......|.|..|      ..:|.||||.|||..:.||||:.....|..|.:|        
  Rat   506 DQNGFQAVHSFASGEAVPWGPLCAAMATCHSLILLDGTIQGDPLDLKMFEATQWEMTVSGDDFHN 570

  Fly   608 ---KMDSVIPKRPQ------FKPLKIIQRYHFSSALKRMSVLAGHLIPYSNEVKHIGA-----VK 658
               ...:::.|.|.      .:.|.|:.::.|||||:||:|:          |:..|.     :|
  Rat   571 KEMLAHTMVVKPPDTVGQVPAEGLAILHQFPFSSALQRMTVI----------VQETGGGRMAFMK 625

  Fly   659 GAPEVIQKMLR--EVPADYEKVYLEYARRGARVLALGIKDLGTLGAQRVREMKREEVECDLTFAG 721
            ||||.:....:  .||..:......|..:|.||:||..|.|.|  ......:.||:||.||.|.|
  Rat   626 GAPERVASFCQPDTVPTTFISELQVYTTQGFRVIALAYKKLET--DCPTTTLMREKVESDLIFLG 688

  Fly   722 FLIISCPMKPDSKSVIKELIQSSHKVVMITGDSPLTACHVARELRFTR--KKLIILTPPEEDRKN 784
            .||:...:|.:::.|::|||.:..:..|||||:..||..|||:.....  :|:|::...|....:
  Rat   689 LLILENRLKEETRPVLEELISARIRTAMITGDNLQTAITVARKSGMVSEGQKVILVEANEATDSS 753

  Fly   785 NWS--WVSID-------GDQSYELDTK---PGSKKLSHLLATHDLCITGEGLQYLQQNQPQYMRQ 837
            :.|  |..::       |.|...::.:   |.:.:..:    :...::|:..|.:.    |:...
  Rat   754 SASITWKLVEEKKHGLFGSQDTYINIREEVPENGREGN----YHFALSGKSFQVIS----QHFSS 810

  Fly   838 LLPQI----TVCARFAPKQKELVITQLKQLGYCTLMCGDGTNDVGALKHANVGVSLLTSAPVKRK 898
            |||:|    |:.||.:|.||..::.:.::|.|...|||||.||.||||.|:|||||         
  Rat   811 LLPKILINGTIFARMSPGQKSSLVEEFQKLDYFVGMCGDGANDCGALKMAHVGVSL--------- 866

  Fly   899 RTEEEQQQAAANAAAIAAQAQANANQQLTTRERALRRRQEHLNQTQARLQNALRDMEEQTMVKLG 963
             :|:|                                                            
  Rat   867 -SEQE------------------------------------------------------------ 870

  Fly   964 DASIAAPFTSKSSSIMCVNHIIKQGRCTLVTTLQMFKILALNALIQAYCQSVLYIDGIKFSDTQA 1028
             ||:|:|||||:.:|.||.|:||:||..|||:..|||.:||.::||.....:||......|:.|.
  Rat   871 -ASVASPFTSKTPNIECVPHLIKEGRAALVTSFCMFKYMALYSMIQYVGVLLLYWKTNSLSNYQF 934

  Fly  1029 TMQGIFIAACFLFIT--------RAKPLKTLSKVAPLPNIFNFYTISTILSQFAVHFGTLYYLTS 1085
            ..|.:.|.. .:.:|        :..|.:...::...|.:.:  .|..||...|:|......:..
  Rat   935 LFQDLAITT-LIGVTMNLNGANPKLVPFRPAGRLISPPLLLS--VILNILLSLAMHIVGFILVQK 996

  Fly  1086 QA------NILAPPREGKVK-LYIDMDAEEKTKYDPNIVS---STVYIICLSLQVATIAVNYKGY 1140
            |.      :.:.|.|...|. |....:..|||:.:....|   :|::.:.....:....|..||.
  Rat   997 QPWYSMDYHSVCPVRNESVSALSASPNVPEKTRSNSTFASFENTTIWFLGTINCIVVALVFSKGK 1061

  Fly  1141 PFMESLRSNRMLMYAIGASAALVILLSTGLA--------PELTEFFEIIDFPTDFRKTLLGVLVL 1197
            ||.:...:|.:.:        ||::|..|:.        |||....:::..|..:|..:|.::..
  Rat  1062 PFRQPTYTNYIFV--------LVLILQMGVCLFILFADIPELHRRLDLLCTPVLWRVYILIMVSS 1118

  Fly  1198 DIVGAFLLDR 1207
            :.|.:..:::
  Rat  1119 NFVVSLAVEK 1128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6230NP_609490.1 P-type_ATPase_cation 220..1152 CDD:319843 284/1004 (28%)
Atp13a4NP_001178587.2 P5-ATPase 17..142 CDD:463565 28/136 (21%)
P-type_ATPase_cation 174..1000 CDD:319842 271/934 (29%)

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