DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6230 and atp1a1a.5

DIOPT Version :9

Sequence 1:NP_609490.1 Gene:CG6230 / 34546 FlyBaseID:FBgn0027582 Length:1225 Species:Drosophila melanogaster
Sequence 2:NP_835200.1 Gene:atp1a1a.5 / 245703 ZFINID:ZDB-GENE-020501-1 Length:1023 Species:Danio rerio


Alignment Length:739 Identity:164/739 - (22%)
Similarity:279/739 - (37%) Gaps:157/739 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 TEEDIKRATQTYGNNEMEMVVPEFHELFIERATAPFFVFQVFSVGLWCMDDYWYYSLFTLFMLIA 281
            |.|.::...|.:|.         |..|....|...:|.|.:.:.....::|..|..:...|::..
Zfish    87 TPEWVRFCRQLFGG---------FQTLLWIGAFLCYFAFSIQAATEEPVNDNLYLGIVLTFVVTV 142

  Fly   282 FECTIVKQQLRNMSEIRKMGN-KPYLIYAFRQNKWRHLGSDELLPGDLVSITRSQNDNIVPCDL- 344
            ..|....|:.::...:....| .|......|..:.:.:.::|::.||||.:   :..:.:|.|: 
Zfish   143 NGCFSYSQEAKSCRIMDSFKNLVPQKALVVRDGEKKIIDAEEVVVGDLVEV---KGGDKIPADIR 204

  Fly   345 VILRGSCIVDESMLTGESVPLMKESLESLDNLDVEMDAEGDGKLFVLFGGTKVVQHTAPTKESLR 409
            ::....|.||.|.|||||.|.::....|.:|   .::...     :.|..|..:           
Zfish   205 IVSSHGCKVDNSSLTGESEPQIRTPDMSSEN---PLETRN-----IAFFSTNCI----------- 250

  Fly   410 APDGGCIGYVIRTGFNTSQGKL--LRTILFGANRATENNVETFAFI----------AFLMVFAVA 462
              ||...|.|:.||..|..|::  |.:.|.|........:|.|..|          .||::..: 
Zfish   251 --DGAARGIVVNTGDRTVMGRIASLASNLEGGQTPLGREIEHFIHIITGVAVFLGTTFLIISVM- 312

  Fly   463 AASYVWVKGSEDPERNRYKLFLECTLILTSIIPPDLPIELTLAVNTSLIQLTKLFVFCTEPFRIP 527
             ..:.|::|.         :|| ..||:.: :|..||..:|:|:..:...:.|..........:.
Zfish   313 -LGFTWLEGI---------IFL-IGLIVAN-VPEGLPCTVTVALTLTAKHMAKKNCLVKNLEAVE 365

  Fly   528 FAGKVQICCFDKTGTLTTDNLMVE--------GIAGLAPNGACVPIEKAEGN---TVQVLACCH- 580
            ..|.....|.|||||||.:.:.|.        .||....|......:::...   ..:|...|: 
Zfish   366 TLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHIADTTENQTGASFDRSSATWSALARVAGLCNR 430

  Fly   581 --------SLALLDDGLVGDPLEKATLAAVD---WTLTKMDSVIPKRPQFKPLKIIQRYHFSSAL 634
                    .|.:|.....||..|.|.|..::   .::|.|....||..:. |...|.:|..|.  
Zfish   431 AVFQSNQSHLPVLRRETAGDASESALLKCIELCCGSVTGMRENYPKVAEI-PFNSISKYQLSI-- 492

  Fly   635 KRMSVLAGHLIPYSNEVKHIGAVKGAPEVI-------------QKMLREVPADYEKVYLEYARRG 686
                    |..|.|:|.||:..:|||||.|             ..:..|:..|::..|::....|
Zfish   493 --------HENPNSSEPKHLLVMKGAPERILDRCSTILIEGKEHPLDDEMKEDFQNAYVQLGGLG 549

  Fly   687 ARVLAL------------GIKDLGTLGAQRVREMKREEVEC---DLTFAGFLIISCPMKPDSKSV 736
            .|||..            |.            ....||:..   :|.|.|.:.:..|.:......
Zfish   550 ERVLGFCHFCLPDDQFPEGF------------AFDTEEMNFPTENLCFVGLMSMIDPPRAAVPDA 602

  Fly   737 IKELIQSSHKVVMITGDSPLTACHVARELRFTRKKLIILTPPEEDRKNNWSWVSIDGDQSYELDT 801
            :.:...:..||:|:|||.|:||..:|       |.:.|::...|...:..:.:.|..|:....|.
Zfish   603 VAKCRSAGIKVIMVTGDHPITAKAIA-------KGVGIISEGNETVDDIAARLKIHIDEVNPRDA 660

  Fly   802 KPGSKKLSHLLATHDLC-ITGEGLQYLQQNQPQYMRQLLPQITVCARFAPKQKELVITQLKQLGY 865
            |              .| |.|..|:.:...|...:.|...:| |.||.:|:||.:::...::.|.
Zfish   661 K--------------ACVIHGGELKNMTDEQLDDVLQHHTEI-VFARTSPQQKLIIVEGCQRQGA 710

  Fly   866 CTLMCGDGTNDVGALKHANVGVSL 889
            ...:.|||.||..|||.|::||::
Zfish   711 IVAVTGDGVNDSPALKKADIGVAM 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6230NP_609490.1 P-ATPase-V 109..1193 CDD:273738 164/739 (22%)
E1-E2_ATPase 310..515 CDD:278548 49/217 (23%)
Cation_ATPase <590..664 CDD:289987 24/76 (32%)
COG4087 <850..901 CDD:226572 15/40 (38%)
atp1a1a.5NP_835200.1 ATPase-IIC_X-K 32..1023 CDD:273445 164/739 (22%)
Cation_ATPase_N 41..115 CDD:214842 7/36 (19%)
E1-E2_ATPase 134..365 CDD:278548 55/267 (21%)
Cation_ATPase 427..521 CDD:289987 28/104 (27%)
COG4087 603..752 CDD:226572 42/154 (27%)
Cation_ATPase_C 799..1008 CDD:279079
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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