DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6230 and Atp13a4

DIOPT Version :9

Sequence 1:NP_609490.1 Gene:CG6230 / 34546 FlyBaseID:FBgn0027582 Length:1225 Species:Drosophila melanogaster
Sequence 2:NP_001158084.1 Gene:Atp13a4 / 224079 MGIID:1924456 Length:1193 Species:Mus musculus


Alignment Length:1257 Identity:333/1257 - (26%)
Similarity:546/1257 - (43%) Gaps:281/1257 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VLPFVPLYLSAFYLWINVTGGQENDTTNNDVITADNQTTTD--NITTWNDVGFIGVLAIAFLHIL 120
            :||.|..:..|:.:|.|.......:.   ||:..   .|||  .|.:|..|.:|.:.|::....|
Mouse    46 MLPLVFYWRPAWRVWANCVPCSLQEA---DVVLL---KTTDEFKIYSWKKVIWISLSALSSTSGL 104

  Fly   121 TLLFCYWSVHVL----AFLTCRRVKLPGANVLAKVVPTPNNGNSKIVPIRSSKLEDGSTQYYFVF 181
            |      ..|.|    .::..|.::.|...|                             .|...
Mouse   105 T------PDHPLITDEGYIINRAIRKPDLKV-----------------------------RYIKV 134

  Fly   182 QKTKYVWNEDRKTFRAVEFPVNGLLSTYSSSR--------GLETEE-DIKRATQTYGNNEMEMVV 237
            ||.:||||.....|:.:     |.|..:.||.        ||.:|| :|:|.  ..|.|.:::.:
Mouse   135 QKIRYVWNNLEGQFQKI-----GSLEDWLSSAKIHQKFGLGLTSEEQEIRRL--ICGPNAIDVEI 192

  Fly   238 PEFHELFIERATAPFFVFQVFSVGLWCMDDYWYYSLFTLFM-LIAFECTI--VKQQLRNMSEIRK 299
            ....:|.|:....||::||:|||.||..:||..|:|..:.| :|:...|:  ::||...:..:.:
Mouse   193 TPIWKLLIKEVLNPFYIFQLFSVCLWFSEDYKEYALAIILMSVISIALTVYDLRQQSVKLHHLVE 257

  Fly   300 MGNKPYLIYAFRQNKWRHLGSDELLPGDLVSITRSQNDNIVPCDLVILRGSCIVDESMLTGESVP 364
            ..|...:....|:...:.|.|..|:||||:.:|.|:..  :|||.:::.|||:|||.||||||:|
Mouse   258 SHNSITVSVYERKAGAQDLESRLLVPGDLLILTGSRVQ--MPCDAILIDGSCVVDEGMLTGESIP 320

  Fly   365 LMKESL-ESLDNLDVEMDAEGDGKLFVLFGGTKVVQHTAPTKESLRAPDGGCIGYVIRTGFNTSQ 428
            :.|..| ::..::..:|.:|.|.:..|||.||:|:|..|....::||       .|::|||||::
Mouse   321 VTKTPLSQTASSVPWKMQSEADPRRHVLFCGTEVIQAKAAGSGAVRA-------VVLQTGFNTAK 378

  Fly   429 GKLLRTILFGANRATENNVETFAFIAFLMVFAVAAASY---VWVKGSEDPERNRYKLFLECTLIL 490
            |.|:|:||:......:...:...|:..|:..|.....|   |:|...|.||    ::..:...::
Mouse   379 GDLVRSILYPKPMNFKLYRDAIRFLLCLVGTATIGMVYTLCVYVLSGEPPE----EVVRKALDVI 439

  Fly   491 TSIIPPDLPIELTLAVNTSLIQLTKLFVFCTEPFRIPFAGKVQICCFDKTGTLTTDNLMVEGIAG 555
            |..:||.||..||..:..:..:|.|..:||..|.||...|::.:.|||||||||...|...|:..
Mouse   440 TIAVPPALPAALTTGIIYAQRRLKKKGIFCISPQRINVCGQLNLVCFDKTGTLTRGGLDPWGVVP 504

  Fly   556 LAPNGACVPIEKAEGNTV------QVLACCHSLALLDDGLVGDPLEKATLAAVDWTLT------- 607
            ...||.......|.|..:      ..:|.||||.|||..:.||||:.....|..|.:|       
Mouse   505 CDQNGFQAVHSFASGKALPQGPLCAAMASCHSLILLDGTIQGDPLDLKMFEATKWEMTASGDDFH 569

  Fly   608 -----------KMDSVIPKRPQFKPLKIIQRYHFSSALKRMSVLAGHLIPYSNEVKHIGA----- 656
                       |...::.:.|. :.|.|:.::.|||||:||:|:          |:.:|.     
Mouse   570 IKEMLAHTIVVKPTDMVAQVPA-EGLAIVHQFPFSSALQRMTVI----------VQEMGGGRLAF 623

  Fly   657 VKGAPEVIQKMLR--EVPADYEKVYLEYARRGARVLALGIKDLGTLGAQRVREM-------KREE 712
            :|||||.:....:  .||..:......|..:|.||:||..|.|         ||       .||:
Mouse   624 MKGAPERVASFCQPDTVPTSFISELQIYTTQGFRVIALAYKKL---------EMDCPTTALMREK 679

  Fly   713 VECDLTFAGFLIISCPMKPDSKSVIKELIQSSHKVVMITGDSPLTACHVARELRFTR--KKLIIL 775
            ||.||.|.|.||:...:|.::|.|::|||.:..:.||||||:..||..|||:.....  :|:|::
Mouse   680 VESDLVFLGLLILENRLKEETKPVLEELISARIRTVMITGDNLQTAITVARKSGMVSEGQKVILV 744

  Fly   776 TPPEEDRKN--NWSWVSIDGDQSYELDTKPG--SKKLSHLL-----------ATHDLCITGEGLQ 825
            ...|....:  :.||..::       :.|||  ..:.:::.           .::...::|:...
Mouse   745 EANEATGSSSASISWKLVE-------EKKPGPFGSQDTYINIREEVPENGRDGSYHFALSGKSFH 802

  Fly   826 YLQQNQPQYMRQLLPQI----TVCARFAPKQKELVITQLKQLGYCTLMCGDGTNDVGALKHANVG 886
            .:.    ||...|||:|    |:.||.:|.||..::.:.::|.|...|||||.||.||||.|:||
Mouse   803 VIS----QYFSSLLPKILINGTIFARMSPGQKSSLVEEFQKLDYFVGMCGDGANDCGALKMAHVG 863

  Fly   887 VSLLTSAPVKRKRTEEEQQQAAANAAAIAAQAQANANQQLTTRERALRRRQEHLNQTQARLQNAL 951
            :||          :|:|                                                
Mouse   864 ISL----------SEQE------------------------------------------------ 870

  Fly   952 RDMEEQTMVKLGDASIAAPFTSKSSSIMCVNHIIKQGRCTLVTTLQMFKILALNALIQAYCQSVL 1016
                         ||:|:|||||:.:|.||.|:||:||..|||:..|||.:||.::||.....:|
Mouse   871 -------------ASVASPFTSKTPNIECVPHLIKEGRAALVTSFCMFKYMALYSMIQYVGVLLL 922

  Fly  1017 YIDGIKFSDTQATMQGIFIAACFLFIT--------RAKPLKTLSKVAPLPNIFNFYTISTILSQF 1073
            |......|:.|...|.:.|.. .:.:|        :..|.:...::...|.:.:  .:..||...
Mouse   923 YWKTNSLSNYQFLFQDLAITT-LIGVTMNLNGANPKLVPFRPAGRLISPPLLLS--VVLNILLSL 984

  Fly  1074 AVHF-GTL------YYLTSQANILAPPREGKVKLYIDMDAEEKTKYDPNIVS---STVYIICLSL 1128
            |:|. |.:      :|:....::.....|....|.......|||:.:....|   :|::.:....
Mouse   985 AMHIVGFILVQKQPWYIMDYHSVCPVRNESASALAASPSVPEKTRSNSTFASFENTTIWFLGTIN 1049

  Fly  1129 QVATIAVNYKGYPFMESLRSNRMLMYAIGASAALVILLSTGLA--------PELTEFFEIIDFPT 1185
            .:....|..||.||.:...:|.:.:        ||::|..|:.        ||:....:::..|.
Mouse  1050 CIFVALVFSKGKPFRQPTYTNYIFV--------LVLILQMGVCLFILFADIPEMHRRLDLLCTPV 1106

  Fly  1186 DFRKTLLGVLVLDIVGAFLLDR 1207
            .:|..:|.::..:.|.:..:::
Mouse  1107 LWRVYILIMISSNFVVSLAVEK 1128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6230NP_609490.1 P-ATPase-V 109..1193 CDD:273738 317/1188 (27%)
E1-E2_ATPase 310..515 CDD:278548 69/208 (33%)
Cation_ATPase <590..664 CDD:289987 26/96 (27%)
COG4087 <850..901 CDD:226572 21/50 (42%)
Atp13a4NP_001158084.1 P-ATPase-V 18..1115 CDD:273738 332/1242 (27%)
P5-ATPase 18..137 CDD:289194 25/131 (19%)
Cation_ATPase_N <170..218 CDD:279080 17/49 (35%)
E1-E2_ATPase 228..472 CDD:278548 79/256 (31%)
Cation_ATPase <596..635 CDD:289987 16/48 (33%)
COG4087 <821..>870 CDD:226572 24/58 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54176
OrthoDB 1 1.010 - - D172453at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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