DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6230 and CG45062

DIOPT Version :9

Sequence 1:NP_609490.1 Gene:CG6230 / 34546 FlyBaseID:FBgn0027582 Length:1225 Species:Drosophila melanogaster
Sequence 2:NP_001286726.1 Gene:CG45062 / 19835139 FlyBaseID:FBgn0266432 Length:794 Species:Drosophila melanogaster


Alignment Length:849 Identity:155/849 - (18%)
Similarity:263/849 - (30%) Gaps:320/849 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   486 CTLILTSIIPPDLPIELT--------LAVNTSLIQLTKLFVFCTEPFRIPFAGKVQICCFDKTGT 542
            |||.|:::|..||...:|        :.|:..|:.:..|.|....|..|... :..:.|.|    
  Fly   134 CTLGLSTVIVSDLVGTMTKRRMRVSEIFVDMGLLSVDNLDVSAQSPRFIELI-RASVLCND---- 193

  Fly   543 LTTDNLMVEGIAGLAPNGACVPIEKAE--GNTVQVLACCHSLALLDDGLVGDPLEKATLAAVDWT 605
                       |.:.|....||..:.:  ||.:.:       |||..||:       .|.::|..
  Fly   194 -----------AVICPGNIGVPKMQKDMYGNILDI-------ALLKFGLM-------ILPSIDLL 233

  Fly   606 LTKMDSVIPKRPQFKPLKIIQRYHFSS------ALKRMSVLAGHLIPYSNEVKHIGAVKGAPEVI 664
            ....:.|..|             |::|      .:.|.....|||       |.:..:||..||:
  Fly   234 RHDHEKVANK-------------HYNSEDKVQVTVHRTRDADGHL-------KLVLLMKGHCEVV 278

  Fly   665 QKML-------REVPAD--YEKVYLEYA----RRGARVLALGIKDLG-TLGAQRVREMK------ 709
            .:..       .|:|.|  .:::.|..|    ..|..|.|...|:|. .|..:|..::.      
  Fly   279 IRRCSTFAIRDEELPLDEQLQEIILSLADGLLEAGRHVRAFAYKELSDELEFRRFSQVNTGLEGG 343

  Fly   710 ----REEVECD---LTFAGFLIISCPMKPDSKSVIKELIQSSHKVVMITGDSPLTACHVARELRF 767
                |:.:..|   |.|.|.:....|.:......:.....:..|::::|...|..|..:|.::. 
  Fly   344 EYKYRDYLAVDTYSLRFLGMIATYNPPRSTIPKAVDRCRAAGIKLIVVTQRKPKMAKALAVDVG- 407

  Fly   768 TRKKLIILTPPEEDRKNNWSWVSIDGDQSYELDTKPGSKKLSHLLATHDLCITGEGLQYLQQNQP 832
                  ||..|.            |..|:..|...|.:.::..:            .||..: :|
  Fly   408 ------ILPAPS------------DTFQAVNLKRMPPTAEVVDM------------SQYADE-KP 441

  Fly   833 QYMRQLLPQI------TVCARFAPKQKELVITQLKQLGYCTLMCGDGTNDVGALKHANVGVSLLT 891
            |:.|:.:.|:      .|||..:..|...:....::||....:.|...:|..|::.::|||    
  Fly   442 QHQRRHIEQLILNQQDLVCAATSTDQLHWIADACRRLGAVVSVIGGTLHDTPAMRSSHVGV---- 502

  Fly   892 SAPVKRKRTEEEQQQAAANAAAIAAQAQANANQQLTTRERALRRRQEHLNQTQARLQNALRDMEE 956
                            |...:|:..:|.|:.                           .|.|...
  Fly   503 ----------------AKYGSAVMCEASADL---------------------------ILLDTSF 524

  Fly   957 QTMVK-LGDASIAAPFTSKSSSIMCVNHIIKQGRCTLVTTLQMFKILALNALIQAYCQSVLYIDG 1020
            .|:|. :||:.:......|:.:.....:|     |.::..| .|.:|.:          .|||. 
  Fly   525 ATLVSVVGDSRLLFENLKKALAYCLATNI-----CNILVYL-FFFLLGI----------PLYIH- 572

  Fly  1021 IKFSDTQATMQGIFIAACFLFITRAKPLKTLSKVAPLPNIFNFYTISTILSQFAVHFGTLYYLTS 1085
                    .|..:.:|    |:....|..||                                  
  Fly   573 --------IMDELILA----FLVNLVPALTL---------------------------------- 591

  Fly  1086 QANILAPPREGKV----KLYIDMDAEEKTKYDPNIVSSTV--------YIICLS----LQVATIA 1134
               |..||.|..:    |:|.|.....:..:..:|:..|:        |.:.::    |....:|
  Fly   592 ---IYEPPEENLMLQMPKVYDDFLLNSRLFFVSHILVGTIEAAAVFMTYFVFMADKGFLPRTLVA 653

  Fly  1135 VNYKGYPFM--------------ESLR------SNRMLMYAIGASAALVILLSTGLAPELTEFFE 1179
            :|...:..|              |:.|      |:..||.........::|..||.|..|..   
  Fly   654 LNIAWHDDMLDDITDSFGQEWSSEARRQLECQVSSLCLMSLAVMQCTNLVLTKTGRANLLAH--- 715

  Fly  1180 IIDFPTDFRKTLLGVLVLDIV-------------------------GAFLLDRICSFL----FGE 1215
                  .||..||.:.||.::                         |.|||.. |.|:    |.|
  Fly   716 ------GFRNWLLSLAVLLLICLCVQLCIMDSTVCLRLEGTNELHFGHFLLTN-CPFMILLVFIE 773

  Fly  1216 TRRK 1219
            |.|:
  Fly   774 TTRR 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6230NP_609490.1 P-ATPase-V 109..1193 CDD:273738 142/792 (18%)
E1-E2_ATPase 310..515 CDD:278548 10/36 (28%)
Cation_ATPase <590..664 CDD:289987 14/79 (18%)
COG4087 <850..901 CDD:226572 9/50 (18%)
CG45062NP_001286726.1 E1-E2_ATPase <13..132 CDD:278548
Cation_ATPase 190..284 CDD:289987 28/142 (20%)
Cation_ATPase_C 582..777 CDD:295563 42/241 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438585
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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