DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6230 and catp-6

DIOPT Version :9

Sequence 1:NP_609490.1 Gene:CG6230 / 34546 FlyBaseID:FBgn0027582 Length:1225 Species:Drosophila melanogaster
Sequence 2:NP_001255430.2 Gene:catp-6 / 177822 WormBaseID:WBGene00012341 Length:1267 Species:Caenorhabditis elegans


Alignment Length:1200 Identity:317/1200 - (26%)
Similarity:532/1200 - (44%) Gaps:291/1200 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 VLAK---VVPTPNNGNSKIVPIRSSKLEDGSTQYYFVFQKTKYVWNEDRKTFRAVE--------- 199
            ||.|   .:||.|....|:..:|           :||::|.:|||.:|..:..:|:         
 Worm    88 VLRKSNATIPTENGEMRKVPELR-----------WFVYRKLEYVWIDDLNSDESVDEISDNDNCW 141

  Fly   200 ---------FPVNGLLSTYSSSRGLETEEDIKRATQTYGNNEMEMVVPEFHELFIERATAPFFVF 255
                     .|...||:...|:.|| |..:|.|..:.||.||:.:.:.....|.:.....||:||
 Worm   142 KTSFEIANRIPCRSLLAVSESNFGL-TLSEISRRLEFYGRNEIVVQLRPILYLLVMEVITPFYVF 205

  Fly   256 QVFSVGLWCMDDYWYYSLFTLFMLIAFECTIVK-QQLRNMS-EIRKMGNKPYLIYAFRQNKWRHL 318
            |:|||.:|..|:|.||:  :|.::::....::. .|:|... .:|.|.:....:...|:.....:
 Worm   206 QIFSVTVWYNDEYAYYA--SLIVILSLGSIVMDVYQIRTQEIRLRSMVHSTESVEVIREGTEMTI 268

  Fly   319 GSDELLPGDLVSITRSQNDNIVPCDLVILRGSCIVDESMLTGESVPLMKESL--ESLDNL-DVEM 380
            |||:|:|||::.|  ..:..::.||.|::.|:.||:||:|||||||:.|.:|  |:.|:: ::|.
 Worm   269 GSDQLVPGDILLI--PPHGCLMQCDSVLMNGTVIVNESVLTGESVPITKVALTDETNDSVFNIEK 331

  Fly   381 DAEGDGKLFVLFGGTKVVQHTAPTKESLRAPDGGCIGYVIRTGFNTSQGKLLRTILFGANRATEN 445
            :::.     |||.||:|:|......:.::|       .|:||.::|.:|:|:|:|::........
 Worm   332 NSKN-----VLFCGTQVLQTRFYRGKKVKA-------IVLRTAYSTLKGQLVRSIMYPKPVDFRF 384

  Fly   446 NVETFAFIAFLMVFAVAAASYVW------VKGSEDPERNRYKLFLECTLILTSIIPPDLPIELTL 504
            ..:.|.||.||.  .::...:::      ::|:     ...::.:....|:|..:||.||..:::
 Worm   385 TKDLFKFILFLA--CISGCGFIYTIIVMIMRGN-----TLRRIIVRSLDIITITVPPALPAAMSV 442

  Fly   505 AVNTSLIQLTKLFVFCTEPFRIPFAGKVQICCFDKTGTLTTDNL---MVEGIAGLAPNGAC--VP 564
            .:..:.::|.|..:||..|..|...|.:.:.|||||||||.|.|   :|..:.. |.|...  |.
 Worm   443 GIINAQLRLKKKEIFCISPSTINTCGAINVVCFDKTGTLTEDGLDFHVVRPVMS-AVNQEIQKVK 506

  Fly   565 IEKA--------------------EGNTVQVLACCHSLALLDDGLVGDPLEKATLAAVDWTL--- 606
            :||:                    :|:.|:.:|.||||..::..|.||||:........||:   
 Worm   507 LEKSNRTEFMGEMTELTSRNGLPFDGDLVKAIATCHSLTRINGVLHGDPLDLILFQKTGWTMEEG 571

  Fly   607 ---------TKMDSVIPKRPQFKP-------LKIIQRYHFSSALKRMSVLA--------GHLIPY 647
                     .:.|:|.|.  ..||       ..:|:::.|||:|:||||:.        .:::.|
 Worm   572 IEGDIEEETQRFDNVQPS--IIKPTDDKSAEYSVIRQFTFSSSLQRMSVIVFDPREDRPDNMMLY 634

  Fly   648 SNEVKHIGAVKGAPEVIQKML--REVPADYEKVYLEYARRGARVLALGIKDLGTLGAQRVREMKR 710
            |         ||:||:|..:.  ..||.||......||:.|.|::|:..:.| .|...:..::||
 Worm   635 S---------KGSPEMILSLCDPNTVPEDYLLQVNSYAQHGFRLIAVARRPL-DLNFNKASKVKR 689

  Fly   711 EEVECDLTFAGFLIISCPMKPDSKSVIKELIQSSHKVVMITGDSPLTACHVARE---LRFTRKKL 772
            :.|||||...|.:::...:||.:..||.:|.:::.:.||:|||:.||...||||   :|.:::..
 Worm   690 DAVECDLEMLGLIVMENRVKPVTLGVINQLNRANIRTVMVTGDNLLTGLSVARECGIIRPSKRAF 754

  Fly   773 IILTPP------------------------EEDR-------KNNWSWVSIDGD----QSYELDTK 802
            ::...|                        |:|.       .:.|.. |.:||    .:.|::| 
 Worm   755 LVEHVPGELDEYGRTKIFVKQSVSSSDEVIEDDASVSISMCSSTWKG-SSEGDGFSPTNTEVET- 817

  Fly   803 PG---SKKLSHLLA-THDLCITGEGLQYLQQNQPQYMRQLLPQITVCARFAPKQKELVITQLKQL 863
            |.   :..|.||:| ::.|.|:|.....:....|:.:.||.....|.||.||.||:.::.||:|:
 Worm   818 PNPVTADSLGHLIASSYHLAISGPTFAVIVHEYPELVDQLCSVCDVFARMAPDQKQSLVEQLQQI 882

  Fly   864 GYCTLMCGDGTNDVGALKHANVGVSLLTSAPVKRKRTEEEQQQAAANAAAIAAQAQANANQQLTT 928
            .|...|||||.||..|||.|:.|:||..:                                    
 Worm   883 DYTVAMCGDGANDCAALKAAHAGISLSDA------------------------------------ 911

  Fly   929 RERALRRRQEHLNQTQARLQNALRDMEEQTMVKLGDASIAAPFTSKSSSIMCVNHIIKQGRCTLV 993
                                               :||||||||||...|.||..:|.:||..||
 Worm   912 -----------------------------------EASIAAPFTSKVPDIRCVPTVISEGRAALV 941

  Fly   994 TTLQMFKILALNALIQAYCQSVLYIDGIKFSDTQATMQGIFIAACFLFITRAKP-LKTLSKVAPL 1057
            |:..:||.:|..:|.|......||......:|.|.....:|:...|..:....| ...|:...|.
 Worm   942 TSFGIFKYMAGYSLTQFVTVMHLYWISNILTDGQFMYIDMFLITMFALLFGNTPAFYRLAHTPPP 1006

  Fly  1058 PNIFNFYTISTILSQF----AVHFGTLYYLTSQANILAPPREGKVKLYIDMDAEEKTKYDPNIVS 1118
            ..:.:..::::::.|.    .|.| .:::.|||.....|.:..     :|.:.|:|..     :.
 Worm  1007 TRLLSIASMTSVVGQLIIIGVVQF-IVFFSTSQQPWFTPYQPP-----VDDEVEDKRS-----MQ 1060

  Fly  1119 STVYIICLSL-QVATIAVNY-KGYPFMESLRSNRMLMYAIGASAALVILLSTGLAPELTEFFEII 1181
            .|. :.|:|: |...:|:.| ||.||..:|.||:. |.|:...|.|:.|.             |:
 Worm  1061 GTA-LFCVSMFQYIILALVYSKGPPFRGNLWSNKP-MCALTIFATLLCLF-------------IV 1110

  Fly  1182 DFPTDF-RKTLLGV--------LVLDIVGA 1202
            .:||:. .|||..|        :.:.||||
 Worm  1111 IWPTELVLKTLGNVELPSLTFRIFIVIVGA 1140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6230NP_609490.1 P-ATPase-V 109..1193 CDD:273738 312/1181 (26%)
E1-E2_ATPase 310..515 CDD:278548 58/213 (27%)
Cation_ATPase <590..664 CDD:289987 26/100 (26%)
COG4087 <850..901 CDD:226572 21/50 (42%)
catp-6NP_001255430.2 P-ATPase-V 18..1137 CDD:273738 313/1195 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54176
OrthoDB 1 1.010 - - D172453at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.930

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