DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6230 and catp-1

DIOPT Version :9

Sequence 1:NP_609490.1 Gene:CG6230 / 34546 FlyBaseID:FBgn0027582 Length:1225 Species:Drosophila melanogaster
Sequence 2:NP_001122528.1 Gene:catp-1 / 173307 WormBaseID:WBGene00013672 Length:1121 Species:Caenorhabditis elegans


Alignment Length:867 Identity:182/867 - (20%)
Similarity:305/867 - (35%) Gaps:285/867 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 SRGLETEEDIKRATQTYGNNEMEM-VVPEFHELFIERATAPFFVFQVFSVGLWCMDDYWYY---- 271
            |.||.::| .|:..:..|.|:::. ..|.....|:.:.   .|.|.:..:|...:....|:    
 Worm    89 SDGLHSDE-AKKRLKDGGLNQIDRPQEPSLSRFFLSQF---HFKFWILLLGAAVLSVMTYFIHMA 149

  Fly   272 -------SLFTLFMLIAF-------------ECTIVKQQLRNMSEIRKMGNKPYLIYAFRQNKWR 316
                   :|:...:|||.             :...|.|:.|:|        .|.:.|..|..:.:
 Worm   150 RGFNEPLNLYCAIILIAVVVFMGMLSYWQQAKAKKVLQENRDM--------MPVMSYVIRDCEEQ 206

  Fly   317 HLGSDELLPGDLVSITRSQNDNIVPCDLVILRGSCIVDESM-LTGESVPLMKESLESLDNLDVEM 380
            .:.:||::.||||.:.....   :|.|:.||:.:|::.||. :||..:|...:|.....|:.| .
 Worm   207 EIKADEIVVGDLVYLRAGYK---IPADMRILQANCLMIESHDVTGHRMPQEYKSDPVQANVSV-F 267

  Fly   381 DAEGDGKLFVLFGGTKVVQHTAPTKESLRAPDGGCIGYVIRTGFNTSQGKLLRTILFGANR---- 441
            ||     ..|.|.|:             ...:|..||.|||||..|..|.|       ||:    
 Worm   268 DA-----CNVAFMGS-------------YCTEGEGIGIVIRTGKFTVLGAL-------ANQHHHI 307

  Fly   442 ---ATENNVETFAFIAFLMVFAVAAASYVWVKGSEDPERNRYKLFLEC----------------T 487
               :.....|...|..|:.:.|::.|:.|:              |:.|                .
 Worm   308 PPPSGRLQTELQNFSTFISIVAISMATVVF--------------FIGCFVARFENVLDHFIVGFV 358

  Fly   488 LILTSIIPPDLP---------IELTLAVNTSLIQLTKLFVFCTEPFRIPFAGKVQICCFDKTGTL 543
            :|:.:.:|..||         |...:|....||:..:|         |...|...:.|.||:|||
 Worm   359 VIIVANVPQGLPATVMSQLRIIARRMAQKNILIKKLEL---------IDELGAATVICADKSGTL 414

  Fly   544 TTDNLMVEG-------IAGLA------------PNGACVP-IEKAEGNTVQVLACCH-------- 580
            |.:.::|..       :.|.|            .:..|.. :|:...:.:.|::.|:        
 Worm   415 TMNQMVVTDLWFNSRLVTGQAVDLKHPHLRVMKASMKCPERLEEPLPDILTVMSVCNNGQFEHVR 479

  Fly   581 ----------------SLALLDDGLVGDPLEKATLAAVD-----------WTLTKMDSVIPKRP- 617
                            |.|:|...:      |.....||           ..:.:.|.:....| 
 Worm   480 RGMRRVSTMRAMQKSASEAMLSAHM------KKKFTIVDTRTGQVSGQAGGVMKEADQISETEPT 538

  Fly   618 -----QFKPLK------------------------IIQRYH------FSSALKRMSVLAGHL--- 644
                 :.||.|                        |.|||.      |:|..:...|:|.:|   
 Worm   539 ELGKKRVKPKKNDIFGVPSDVALIKYVELSASVEGIRQRYQTVFEIPFNSIRRCQVVVARYLASD 603

  Fly   645 IPYSNEV---------KHIGAVKGAPEVI---------QKMLREVPADY----EKVYLEYARRGA 687
            .|.::|:         :.:...|||||||         .|.|:.:...|    :..:......|.
 Worm   604 FPMTSELVDNPEEGQSRFMIFTKGAPEVILGKCSNYRQGKELKTIDETYRTECQAAWEMLGNEGR 668

  Fly   688 RVLALGIKDLGTLGAQRVREMKREEVECDLTFAGFLIISCPMKPDSKSVIKELIQSSHKVVMITG 752
            ||:|...|   :..|....:...:|...||.|.|...|..|.:|::.:.|::...:..||.||||
 Worm   669 RVIAFAQK---SFNADDSTKFTGQEYNGDLVFLGMAAIMDPPRPETAAAIEQCKMAGVKVFMITG 730

  Fly   753 DSPLTACHVARELRFTRKKLIILTPPEEDRKNNWSWVSIDGDQ--SYELDTKPGSKKLSHLLATH 815
            |.|.||..:||::......    |...:..|...||..:.|||  :|:      ....:.||..|
 Worm   731 DHPTTATAIARQIGLIGSS----TNLNDVEKPQNSWAVVTGDQLKNYK------KSDWNLLLKNH 785

  Fly   816 DLCITGEGLQYLQQNQPQYMRQLLPQITVCARFAPKQKELVITQLKQLGYCTLMCGDGTNDVGAL 880
            ::                          |.||...:||..::.::::.|....:.|.|.:|...|
 Worm   786 NI--------------------------VFARTNTEQKLEIVQEVQRRGETVAVTGGGVDDTPVL 824

  Fly   881 KHANVGVSLLTSAPVKRKRTEE 902
            .|||||:::..|.....|:|.:
 Worm   825 AHANVGIAMGQSGSDIAKQTAD 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6230NP_609490.1 P-ATPase-V 109..1193 CDD:273738 182/867 (21%)
E1-E2_ATPase 310..515 CDD:278548 54/237 (23%)
Cation_ATPase <590..664 CDD:289987 24/132 (18%)
COG4087 <850..901 CDD:226572 14/50 (28%)
catp-1NP_001122528.1 HAD_like 91..1111 CDD:389748 181/865 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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